Lolium rigidum (rigid ryegrass): 124693368
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Entry
124693368 CDS
T09103
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2
KO
K03255
protein TIF31
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lrd03012
]
124693368
Translation factors [BR:
lrd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124693368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
CLU
TPR_MalT
TPR_8
PAM2
Motif
Other DBs
NCBI-GeneID:
124693368
NCBI-ProteinID:
XP_047082806
LinkDB
All DBs
Position
2:complement(263815669..263825953)
Genome browser
AA seq
1778 aa
AA seq
DB search
MAPKAGKAKPKAKGDKKKKEEKVLPTVLDVTVETPDYTHLTLKGISTDRILDVRKLLAVH
VDTCHLTSFSLSHEVRGAQLKDTVEIASLKPCHLSIVEEEYTEEFAVAHVRRLLDVVACT
TAFGVRKPEQKPAPATDAAAEAGSPGAVVAGGGGGEEPMYPPPKLGEFYDFFSFSHLSPP
IHYIRRSTRPFVDDKREDDFFQIDVRVCNGKPVTIVASRAGFYPSGKRALISHSLVGLLQ
QTNRGFEGAYKALMKAFVEHNKFGNLPYGFRSNTWVVPPVVADSPSVFPPLPTEDETWGG
NGGGLGRDGKHDHRPWAKEFAILAAMPCKTAEERQVRDRKAFLLHSLFVDVGVLKAIAAI
QQLIPNDKSSHEKTNGTASPVLHKQQIGDIKITVTKDKADASSKLDVKLDGSQAPGVSFD
ELAKRNLLKGITADESATVHDTATLGVVLVKHCGYTAVVQVPLDAQLTTVVPAQQDIHIE
DQPEGGSNALNVNSLRMLLQKSCVQSSGAVQRLQSSDSEESDTTTNFVRKIITDSLQNLE
GESPRETRPIRWELGACWVQHLQSQTSEKTDTKKSDETKDVPTVKGLGKQFGQLKEIKKK
SDDKSGKSASSKESTSLNTSDANTGSIQDDKEAILQGALSEAAFQRLRESETGLHAKSPD
ELIEMAHKYYDDTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMRSLGQVVELSDKLP
HIQSLCIHEMVVRAFKHVIRAVIAAVDDINDMAESVASCLNILLGPFPEENNDGKCVEDH
NLRQKWLEVFLMKRFGLGWKDEYSLDLRKYAILRGVCHKVGLELVTKDYDMDMPHPFRKS
DIISIVPIYKHVACSSADGRTLLESSKTFLDKGKLEDAVNYGTKALAKLVAVCGPYHRMT
AGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTE
LALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLG
VDHIQTAASYHAIAIALSLMEAYSLSVQHEKTTLRILQSKLGSEDLRTQDAAAWLEYFES
KALEQQEAARNGTPKPDASIASRGHLSVSDLLDYINPDDELKAKEMLKKQARAKIKGRTG
QNPSEVADDEDQRSPPPNNDRSSTEKENSEVKEKLTEKKNSEVKENGTVVEQVKVKLNDE
IPSNTMVHMPPADYTEECRSDEGWQEAVPKGRTTGNRKTAASVRRPNLAKINTNAVNENG
RYKGRAPPNFSSPRVSPNEAAASVASSPLAKKLAKSSSFNSRASNPAIQSNSGENSPNPK
SMAATPAAAKVISSAAPIVSQTVRKSLSYKEVAIAAPGTLVKALNDVHTEEKHATDPNVN
LESAKAPKESNVRPSEEKDGTIKVSPKDNNSQVSKATDEPKSSNSDSENTNGSLGLNQAE
KASDSAETSTEKKQPSAAQADVPNEEAPILTEANDCSSNDDERDPGEDNQEQLSSGAENE
KSSPSGSEKNDSTVEGAKETTSKLSAAAAPFSPATVPAFGSMAVPGFREHGGLLPSPANV
PPMLSIPLRKHPHQSATARVPYGPRLAGGFNRSGHRVPRSKPILPSGEVLPEANTSPKVM
NPHAAEFVPGQSRSPNGHPGSPNESLASPAGIQASLDGLPSSPDSPVESPKTASPQVSES
GKTSPEGNDTSSGVDVEAGSENKNTEKTNHVESEDGEVKPDIQTIVSEGAEVDATAPKDV
QDDSSVPKDAQDDLSMTEKPKSWADYSDGEVEAVQVAS
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaaggcagggaaggccaagcccaaggccaagggcgacaagaagaagaaggaa
gagaaagttctgcccacggtgctggacgttaccgtggagacgccggactacacccacctc
acgctcaagggcatatcgacggacaggatcctcgacgttcggaagctcctagccgtccac
gtggacacctgccacctcaccagcttctccctctcccacgaggtccgtggggcccagctg
aaggacacggtggaaatagcctccctgaagccctgccacctcagcatcgtcgaagaggag
tacacggaggagttcgccgtcgcgcacgtccgtcggctgctcgacgtcgtcgcgtgcacc
accgcgttcggggtcaggaagcccgagcagaagcctgcgcccgccaccgatgcggccgcc
gaggccgggtctcccggcgccgtggtcgctggcggcggcggcggcgaggagcccatgtac
ccgccgccgaagctgggggagttctacgacttcttctccttctcccacctctcgccgcct
atccactacattaggaggtccacgcgtccattcgtcgatgacaagagagaggatgacttc
ttccagatcgatgtgagggtttgtaacgggaagccggtgacaatcgtggcatcccgagct
ggattctatccatcagggaagcgggcactcattagccactcccttgttgggttgttgcag
cagacgaaccgcggattcgagggggcttacaaggctcttatgaaggcatttgttgagcac
aacaagtttggaaatcttccctacggattccggtcaaacacttgggtcgttccccctgtt
gttgctgattctccatcagtgttcccaccccttccaacagaagatgaaacttggggtggc
aatggcggtggcctgggaagagatgggaaacatgaccacagaccatgggcgaaagaattt
gccatcctggccgcaatgccttgtaaaacagccgaggagaggcaagtcagagataggaag
gctttcctactccatagcttatttgtagatgttggtgtccttaaagctattgcagctatc
cagcaactgatccccaacgacaagagttcacatgagaaaacaaatggcactgcaagtcca
gttttgcacaagcaacaaattggggatataaaaataactgtgacaaaagataaagcagat
gcaagttcgaagttagatgttaagttagatggaagtcaggctccaggagtatcttttgac
gaacttgctaagaggaacttgttgaagggaatcactgctgatgagagtgcaacagtacat
gatactgctactcttggtgttgttcttgtgaagcactgtggatatacagctgttgtccaa
gttccattggatgctcaattaacaactgttgttccagcacagcaggatattcacattgaa
gaccagcctgagggaggtagcaacgctctcaatgtcaacagcttaaggatgctgcttcag
aaatcatgtgttcagtcatctggagcagttcaacgcttgcagagttctgattctgaagag
agcgacactactacaaattttgttcgtaaaataattacagatagcctgcagaatcttgaa
ggcgagtctccaagagaaacaagaccaatcagatgggagcttggtgcttgctgggtacaa
catctacagagtcaaacttctgagaagaccgacacaaagaaaagtgatgagactaaggat
gttcctacggtaaagggcctgggtaaacaatttggtcagctgaaggagatcaagaagaag
tcagatgataagagtggaaagagtgcatcctcgaaagaaagtacttcgctaaatacaagt
gatgcaaacactggcagcatacaggatgataaagaggctattctgcagggcgcgctatca
gaagctgctttccaaagactaagagaatctgaaactggacttcatgctaagtcccccgat
gaattgattgagatggcacacaaatattatgatgatactgccctgccaaaattggtagca
gactttggttcacttgagctttcccctgttgatggaaggacattaacggattttatgcac
accagaggccttcagatgcgttcactgggacaagtggttgagctctctgataagctccca
catatacagtcactttgtatacacgagatggtagttcgagcgtttaagcacgtaattcgg
gctgttattgcagctgttgatgatataaatgacatggctgaatcagttgcatcatgttta
aatatattgctgggaccatttccagaagaaaataacgatggcaagtgcgtagaggatcat
aatctcaggcagaaatggttggaagtctttttaatgaagagatttggcttgggatggaaa
gatgaatatagccttgatctgagaaagtatgccattctccgtggcgtctgccataaggta
ggacttgagcttgttaccaaagactacgatatggatatgccacatccattcagaaagtca
gatattatcagtattgttcctatctacaagcatgttgcatgctcgtcagcagatggtcgc
accctgttggagtcatccaagactttcctggacaaaggaaaacttgaagatgctgttaac
tacggcacaaaggctcttgcaaaactggttgcagtttgtggtccatatcacagaatgact
gcaggagcgtacagccttttggcagtagtgctttatcataccggcgacttcaaccaggca
actatctatcaacagaaggctttagatattaacgagagggaacttggacttgatcaccca
gatactatgaaaagctatggagatcttgctgttttctactatcgcctgcaacatacagaa
ttggcgctaaagtatgtcaatcgtgccttgtatcttttgcacctgacatgtggcccatct
caccctaatactgctgcaacttacatcaatgttgctatgatggaagaagggttgggtaac
gtccatgttgcactccgttacttgcatgaggcgttaaaatgcaaccaacgattgcttggt
gttgatcatatacagacggctgctagttatcatgctattgctattgctttgtctttaatg
gaagcatactctttgagtgtccaacatgaaaagaccactctacggatacttcaatcaaag
ctcggatcagaagatcttcggacacaggatgctgctgcctggctggaatacttcgaatcg
aaggcactagagcagcaggaagcagcacgcaacggtactccaaagcctgatgcttcaata
gcaagcagaggccatctgagtgtgtcagatcttctagattatatcaatccagatgatgag
ctcaaggccaaggaaatgctaaagaaacaagcccgtgctaaaataaaaggtcgtaccggg
caaaacccatctgaagtagccgatgatgaagatcaaaggagccctccacctaacaatgat
cgttcatcgactgagaaggaaaactctgaagtgaaagagaaattaaccgagaagaaaaac
tctgaagtcaaagagaacggaacggttgttgagcaagtgaaagtgaaactaaatgatgaa
ataccaagtaacactatggtccacatgcctccagctgattatactgaagagtgcagatct
gatgagggttggcaagaggctgttccaaagggaagaaccacagggaatcgcaaaactgct
gcaagcgtgaggaggccaaacctggcaaagatcaatacaaatgccgtaaacgagaatgga
agatacaaaggcagagctccacccaacttctcttcccctcgagtttcacctaatgaggcc
gcagcttctgttgcctccagccctcttgcaaagaaattggcaaagagttcgagcttcaat
tccagagcaagtaaccctgctatccaatcaaacagtggggaaaattcacccaatcccaaa
tccatggcagcaaccccagcggctgccaaggtgatatcatctgcagcaccaattgtcagt
caaacagtaaggaagtcactgtcatacaaggaagttgcaatagctgcaccaggaactctt
gtcaaagcattgaatgatgtacatacagaggaaaagcatgcaactgatcctaatgtaaat
cttgaaagtgctaaggctccgaaagaaagcaatgttcgcccttctgaagagaaagatgga
acaataaaagtgtcaccaaaggataacaattcgcaggtatcaaaagcaacagatgaaccc
aaatcttccaattctgatagtgaaaatacaaatggttccctaggattaaatcaagctgaa
aaggcctcagattcagcagagacatctacagagaagaagcaaccatcagcagcacaagct
gacgtcccaaatgaagaagcaccaattttgactgaggcaaatgattgttcgtccaatgat
gatgaaagagacccaggagaggataatcaagaacagctgtctagtggggccgaaaatgag
aaatcttcaccatctggaagtgaaaagaatgattcaacagtagaaggtgccaaagagaca
accagtaagctttctgctgctgctgctccattcagtccagccactgtaccagcttttggt
tcaatggctgtaccaggtttcagagaacatggaggactattgccatcaccagccaatgta
cccccaatgttatccatccctctccgtaagcaccctcaccaatctgcaacggcaagggtc
ccttatggtccacgtctagctggagggttcaacagatcagggcaccgggtgcctcgtagc
aagcctattttgccaagtggtgaagtccttccagaagcaaacacatcccctaaagtgatg
aatcctcatgcggcggagtttgtgccgggtcaatctcggagccctaatggccatccagga
tcgccaaacgagtctctagcatcgccagccggtatccaagcttcactggatgggcttcca
tcatctccagatagtcctgtcgaatcacccaagactgcatccccacaagtttctgaaagt
ggcaagactagtcctgaaggaaatgatacatctagtggagttgatgttgaagctggaagt
gaaaacaagaacacggagaagaccaaccatgtggaaagtgaagacggtgaagtgaagcct
gatattcaaaccatagtttctgaaggtgctgaagttgacgcaacagcccccaaagatgtc
caagatgactcttcagtcccaaaagatgctcaagatgatttaagcatgactgaaaagcca
aagtcctgggctgattacagtgatggagaagtcgaggctgttcaggttgcgagctga
DBGET
integrated database retrieval system