Lolium rigidum (rigid ryegrass): 124693379
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Entry
124693379 CDS
T09103
Name
(RefSeq) serine/threonine-protein kinase VPS15-like
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
124693379
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lrd01001
]
124693379
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124693379
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124693379
Protein kinases [BR:
lrd01001
]
Serine/threonine kinases: Other
VPS15 family
124693379
Membrane trafficking [BR:
lrd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124693379
Autophagy
Autophagosome formation proteins
PI3K complex
124693379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
WD40
WD40_Prp19
WDR55
EIF3I
HEAT
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
PPP2R1A-like_HEAT
Beta-prop_EML_2
Pkinase
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Tti2
Cohesin_HEAT
NBCH_WD40
DUF7691
Beta-prop_HPS5
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
124693379
NCBI-ProteinID:
XP_047082816
LinkDB
All DBs
Position
2:complement(265714364..265722163)
Genome browser
AA seq
1231 aa
AA seq
DB search
MDIFSLGCVLAELFLEGQPLFELSQLLAYRRGQYDPMHTLEKIQDAGIQDMVLHMIQLDP
KERLSCKSYLQKYETVVFPTYFSRLHNFFSDIVPLGSDARVEKTQENFERIHDMMISGLT
GEQNQVSGKEDIGGQVTNSPRESAKSASLVKRNIPGDHRQIAGDLNLLLKEVEQRNVHGG
TKVMQDTESYAASNVSRANGIGPSQQVNQTQSQTTSVLVAQSNDVSHVHKISKSNLLALV
SGYDAQSDTYSFDIFQQTHSKVSCEGMVLLASLICSSIRSVKKPELRRAGLILLKISSTY
IDDDSRLQLVIPYVIAMLSDPAAIVRCAALETLSDVLCLVQDFPISDAMIFPEYILPMLS
LLPDDTEESVRVCYASNIYKLALTAYRFLLRSRSITDAGPLDKSVVAAGSQSAEAPLKKK
HDKIDRQLARLRKSIYDIVQELVMGPKQTPNVRRALLQDIGYLCYFFGHRQSNDFLLPIL
PAFLNDHDEQLRAVYFGQIVVVCYFIGSRSVEEYLLPYLEQALSDDMEAVVVNVLDCLTM
MCESRYLRKRVIVGLFGKALPLLCHPIQWVKRSAVRLIAACSESLGPVDTYVYLSPHLRH
FLHREPPSLSEAALLACLKPPVSKAVLYQALEVTKDTGNVLLKGDGKKEQTLPGGKYPAT
TQSGPSATLEDAVRLRTSNLSGNVSLDIKDSISSDKSLYYGYAPHASTVSSSFYDGLSKG
IPSYSVTTDKRGLGEIFMPWESNRHPGLSSSVQGLQTRENHFSSRHGDLSISDSMKSSLS
VPGDGVSNSETAVSPSFTRSAVALETGWKPRGVLVAHLQEHRLSVNDIAVSDDNTFFVTA
SDDSSVKIWDTRKLEKDIAFRSRLTYNLGSSQALCTTMLSGSSQVVVGDSDGALHLFSVD
CARGVGSVAERYSGIVNVKRKDLKEGAILSVANCSSDSFSPTILFSTEHCDIHKWDARTN
SESWSFKSSPEEGYISALVMGQCGNWFISGSSRGVLTLWDHRFLLPVNSWNYSTVTPIEK
LCLLIPPHNSISSAGRPLVFVAAGYNEVSLWNAENGSCHQMFRTASIENEAVMLKTPSRP
VNKTNAKDIRRAGSYKYRIEELSSPPPRLPGIRCLLPLPGGDLLTGGTDLKIRYWDQARP
EQSFCIAGPSAKGVGNDECYDIKSSYGVQVVQETCKQPTPSSRLTHKTQLAMAAADSAGC
HRDAILALASVNLSSQRLISASRDGAVKVWK
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggacatattttctctcgggtgtgttcttgctgaacttttcttggaaggtcagcccctc
tttgagctttcacaacttctcgcttatcggcgtggccagtatgaccctatgcatacccta
gaaaagatacaagatgctggtatccaagacatggtacttcacatgattcaattagacccc
aaagaaaggctatcatgtaaaagctatctgcaaaaatatgaaactgtcgtttttccaacc
tatttttcaagattgcacaacttcttctcggatattgttccacttggctcagatgctagg
gttgagaagacacaggaaaattttgaaaggatacatgacatgatgataagtggcttaaca
ggtgaacaaaatcaagtatctgggaaggaagacattggaggacaagttacaaactcaccg
agagaatctgccaaaagtgcatccttagttaagagaaacattcctggagaccatcgtcag
atcgctggagatctcaatctccttctcaaggaagtggagcaaaggaacgtccatggaggc
acaaaggtcatgcaggacacagaaagttatgctgcttcaaatgtttcacgtgcaaatggt
attgggccctcgcagcaggttaatcaaactcaaagtcaaactacaagtgtcttggtggcc
cagagcaatgatgtatcccatgtgcacaagatatccaagagtaacttgcttgctttagtg
tctggttatgatgcccaatcggatacctatagttttgacattttccaacagacacattcc
aaggtgagctgtgaaggcatggtcttgcttgcctcattaatctgctcgtccatacgaagt
gtcaaaaaaccagaactaagaagggccggtctcatccttctgaagatttcttccacatac
atagatgacgatagtcgcttgcagctggttattccctatgttattgcaatgctttcagat
cccgctgccatagttcgctgcgctgctttggaaaccttgtctgatgttctctgtcttgtt
caagacttccctatcagtgatgcaatgatcttccctgagtacatcctcccaatgctctct
ttgctcccagatgatacagaggagagtgtcagagtttgctatgccagtaacatttataag
ctagctttaacagcttatagattcttgcttcgttctcggagcataactgatgctgggcct
ctagacaaatcagtggttgctgctggatcacagtctgcagaagcaccactgaagaagaag
catgataaaattgatcggcaacttgcacgtctgaggaaaagtatttatgacatagtgcaa
gagttggtaatgggaccaaagcagacacctaatgtccgcagagctctcctgcaggatata
ggttatctatgttacttttttgggcacagacaaagtaatgattttcttcttcctatactt
ccagcatttctgaatgaccatgatgagcagctccgtgcagtttactttggtcaaattgtc
gttgtttgctacttcattggttcaagaagtgtcgaggaatatcttttgccctatcttgaa
caggcactaagtgacgatatggaagctgtggttgtaaacgtacttgactgcttaaccatg
atgtgtgaaagtcgttacttgaggaaaagggtaatcgttggcttatttgggaaggccctt
cctctactatgtcatccaattcaatgggttaaacggtctgctgtaaggcttattgctgct
tgtagcgagagcttagggcctgtagatacttatgtgtacctttctccacatctaaggcat
tttctacacagggagccaccttcattgtctgaagctgctcttcttgcatgtcttaagcct
ccagtctcgaaagcagtcttataccaagctttagaggttaccaaggacacaggaaacgtt
ttactgaagggtgatggtaaaaaagaacagacattacctggtggaaaatatcctgctacg
acacaaagtgggccctctgccactctggaagatgctgtaaggttgagaacatctaatttg
tctggcaatgtgtctttggacatcaaagattcaatttcttcagataaatcgttatattat
ggctacgcaccacatgcatctactgtgagcagttcattttatgatggattgtctaaggga
attccatcatattctgttaccactgataagcgtggtttaggagaaatatttatgccctgg
gaatccaaccggcatccaggtttatcaagttcagttcaaggcctccagactagagagaat
catttcagtagcaggcatggtgatttaagcatcagtgactcaatgaagagcagcttgtct
gtgccaggtgatggcgtctccaactctgagactgcagtgtcgccctccttcaccagatca
gcagtggctctggagacaggttggaagcctcgtggagttctagtggcacatctccaagaa
catcggttgtctgtcaatgatattgcggtgtcagatgacaacaccttttttgtgacggct
tcggatgactcaagtgttaagatatgggatacaagaaagttggaaaaggacattgccttc
agatcaaggttgacatataacttgggtagtagccaagctctatgtacaacaatgctttct
ggcagttcacaggttgttgttggtgatagcgatggcgcattgcacttgttttctgttgac
tgcgcacgcggtgttgggagtgttgcagagaggtattctggcatcgttaacgtaaaaagg
aaagatctgaaagaaggtgctattctcagtgttgcaaattgttcatcggacagctttagc
ccaaccatcctattcagcactgaacattgtgacatccataaatgggatgcaaggaccaat
tcagaatcttggtcatttaaatcctcaccggaggagggctatatctcagcgcttgtgatg
ggccagtgtggaaattggttcatctcagggtcttcaagaggtgttcttacgttgtgggat
cataggtttttgcttcctgtcaactcatggaactattccacagtaacccctatagagaaa
ttgtgcttgcttataccaccacacaactcaatatcttctgctggaagaccactggttttt
gtggccgcaggctacaatgaagtttccttgtggaatgctgagaatggtagctgccaccag
atgtttaggacagcaagcatcgagaatgaggctgttatgctgaagacaccatcaagacct
gttaacaagacaaacgccaaagacataaggcgagcgggaagctacaaatacagaattgag
gaattatctagtccgcctccacgccttcctggcatccgttgcctgcttcctttgccaggg
ggagatctgttgactggaggaacagatttgaagatacgctactgggaccaggccagacct
gagcaaagcttctgcattgctggcccttcagcgaaaggagttggaaatgatgagtgctat
gatataaaatccagctacggtgtacaggttgtacaggaaacgtgtaagcagcctacccca
tcatccaggttgacgcacaagacgcagctcgcgatggctgctgccgattccgctggctgc
caccgggacgccatcctcgcgttggcatctgtcaacctgtcgagccagaggttgatatcg
gccagcagagacggtgccgtcaaagtgtggaaatag
DBGET
integrated database retrieval system
