Lolium rigidum (rigid ryegrass): 124693380
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Entry
124693380 CDS
T09103
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
124693380
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lrd01001
]
124693380
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124693380
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124693380
Protein kinases [BR:
lrd01001
]
Serine/threonine kinases: Other
VPS15 family
124693380
Membrane trafficking [BR:
lrd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124693380
Autophagy
Autophagosome formation proteins
PI3K complex
124693380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
WDR55
Beta-prop_WDR3_2nd
EIF3I
WD40_WDHD1_1st
HEAT
Beta-prop_TEP1_C
PK_Tyr_Ser-Thr
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_TEP1_2nd
PPP2R1A-like_HEAT
PEP5_VPS11_N
APH
Beta-prop_WDR90_POC16_2nd
Kinase-like
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Tti2
WD40_Gbeta
Cohesin_HEAT
DUF7691
NBCH_WD40
HEAT_GCN1
TCAD9
Beta-prop_Vps41
Beta-prop_HPS5
UCR_14kD
Motif
Other DBs
NCBI-GeneID:
124693380
NCBI-ProteinID:
XP_047082817
LinkDB
All DBs
Position
2:complement(265904341..265912184)
Genome browser
AA seq
1453 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSTYNLVLLDVVSRGRFLKSVLCKHDEGLLLVKVYFKRA
GEPLDLKEHERRLERIRRAFQGLEGSHVLPFQIWFQTDKAAYLLRQYFYSNLHDRLSTRP
FLSQIEKKWLAFQLIHAVEQSHSKGVCHGDIKCENVLVTSWNWLYLTDFASFKPTYIPDD
DPSDFSFFFDTGGRRRCYLAPERLHEHGGESQVSADAPLQRSMDIFSLGCVLAELFLEGQ
PLFELSQLLAYRRGQYDPMHTLEKIQDAGIQDMVLHMIQLDPKERLSCKSYLQKYETVVF
PTYFSRLHNFFSDIVPLGSDARVEKTQENFERIHDMMISGLTGEQNQVSGKEDIGGQVTN
SPRESAKSASLVKRNIPGDHHQIAGDLNLLLKEVEQRNVHGGTKVMQDTESYAASNVSRA
NGIGPSQQVNQTQSQTTSVLAAQSNDVSHVHKISKSNLLALVSGYDAQSDTYSFDIFQQT
HSKVSCEGMVLLASLICSSIRSVKKPELRRAGLILLKISSTYIDDDSRLQLVIPYVIAML
SDPAAIVRCAALETLSDVLCLVQDFPISDAMIFPEYILPMLSLLPDDTEESVRVCYASNI
YKLALTAYRFLLRSRSITDAGPLDKSVVAAGSQSAEAPLKKKHDKIDRQLARLRKSIYDI
VQELVMGPKQTPNVRRALLQDIGYLCYFFGHRQSNDFLLPILPAFLNDHDEQLRAVYFGQ
IVVVCYFIGSRSVEEYLLPYLEQALSDDMEAVVVNVLDCLTMMCESRYLRKRVIVGLFGK
ALPLLCHPIQWVKRSAVRLIAACSESLGPVDTYVYLSPHLRHFLHREPPSLSEAALLACL
KPPVSKAVLYQALEVTKDTGNVLLKGDGKKEQTLPGGKYPATTQSGPSATLEDAVRLRTS
NLSGNVSLDIKDSISSDKSLYYGYAPHASTVSSSFYDGLSKGIPSYSVTTDKRGLGEIFM
PWESNRHPGLSSSVQGLQTRENHFSSRHGDLSISDSMKSSLSVPGDGVSNSETAVSPSFT
RSAVALETGWKPRGVLVAHLQEHRLSVNDIAVSDDNTFFVTASDDSSVKIWDTRKLEKDI
AFRSRLTYNLGSSQALCTTMLSGSSQVVVGDSDGALHLFSVDCARGVGSVAERYSGIVNV
KRKDLKEGAILSVANCSSDSFSPTILFSTEHCDIHKWDARTNSESWSFKSSPEEGYISAL
VMGQCGNWFISGSSRGVLTLWDHRFLLPVNSWNYSTVTPIEKLCLLIPPHNSISSAGRPL
VFVAAGYNEVSLWNAENGSCHQMFRTASIENEAVMPKTPSRPVNKTNAKDIRRAGSYKYR
IEELSSPPPRLPGIRCLLPLPGGDLLTGGTDLKIRYWDQARPEQSFCIAGPSAKGVGNDE
CYDIKSSYGVQVVQETCKQPTPSSRLTHKTQLAMAAADSAGCHRDAILALASVNLSSQRL
ISASRDGAVKVWK
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgcgcggacgacgcaggcgtccgcgaccgagtactacctgcacgac
ctgccctccacctacaacctcgtgctcctcgacgtcgtctcccgcggccgcttcctcaag
tccgtcctctgcaagcacgacgagggcctcctcctcgtcaaggtctacttcaagcgcgca
ggcgagccgctcgacctcaaggagcacgagcggaggctggagcggatccggagggccttc
caggggctcgagggctcccacgtcctgcccttccagatctggtttcaaacggacaaggca
gcgtatctcctgaggcagtacttctacagcaacctgcacgatagacttagcacgcgccct
ttcctcagtcagatagagaaaaaatggcttgcttttcagttaatccatgccgtggagcag
agccatagtaagggagtttgccatggtgacatcaaatgtgagaatgtactcgtgacctca
tggaattggctctacctcacagactttgcgtcttttaagccaacatacatcccagatgat
gatccatctgatttttccttcttctttgacactggaggaaggcgaagatgctatctagca
cctgagagattacatgaacatggtggtgagtcccaggtttcagcagatgcgcctttgcaa
cgttctatggacatattttctctcgggtgtgttcttgctgaacttttcttggaaggtcag
cccctctttgagctttcacaacttctcgcttatcggcgtggccagtatgaccctatgcat
accctagaaaagatacaagatgctggtatccaagacatggtacttcacatgattcaatta
gaccccaaagaaaggctatcatgtaaaagctatctgcaaaaatatgaaactgtcgttttt
ccaacctatttttcaagattgcacaacttcttctcggatattgttccacttggctcagat
gctagggttgagaagacacaggaaaattttgaaaggatacatgacatgatgataagtggc
ttaacaggtgaacaaaatcaagtatctgggaaggaagacattggaggacaagttacaaac
tcaccgagagaatctgccaaaagtgcatccttagttaagagaaacattcctggagaccat
catcagatcgctggagatctcaatctccttctcaaggaagtggagcaaaggaacgtccat
ggaggcacaaaggtcatgcaggacacagaaagttatgctgcttcaaatgtttcacgtgca
aatggtattgggccctcgcagcaggttaatcaaactcaaagtcaaactacaagtgtcttg
gcggcccagagcaatgatgtatcccatgtgcacaagatatccaagagtaacttgcttgct
ttagtgtctggttatgatgcccaatcggatacctatagttttgacattttccaacagaca
cattccaaggtgagctgtgaaggcatggtcttgcttgcctcattaatctgctcgtccata
cgaagtgtcaaaaaaccagaactaagaagggccggtctcatccttctgaagatttcttcc
acatacatagatgacgatagtcgcttgcagctggttattccctatgttattgcaatgctt
tcagatcccgctgccatagttcgctgcgctgctttggaaaccttgtctgatgttctctgt
cttgttcaagacttccctatcagtgatgcaatgatcttccctgagtacatcctcccaatg
ctctctttgctcccagatgatacagaggagagtgtcagagtttgctatgccagtaacatt
tataagctagctttaacagcttatagattcttgcttcgttctcggagcataactgatgct
gggcctctagacaaatcagtggttgctgctggatcacagtctgcagaagcaccactgaag
aagaagcatgataaaattgatcggcaacttgcacgtctgaggaaaagtatttatgacata
gtgcaagagttggtaatgggaccaaagcagacacctaatgtccgcagagctctcctgcag
gatataggttatctatgttacttttttgggcacagacaaagtaatgattttcttcttcct
atacttccagcatttctgaatgaccatgatgagcagctccgtgcagtttactttggtcaa
attgtcgttgtttgctacttcattggttcaagaagtgtcgaggaatatcttttgccctat
cttgaacaggcactaagtgacgatatggaagctgtggttgtaaacgtacttgactgctta
accatgatgtgtgaaagtcgttacttgaggaaaagggtaatcgttggcttatttgggaag
gcccttcctctactatgtcatccaattcaatgggttaaacggtctgctgtaaggcttatt
gctgcttgtagcgagagcttagggcctgtagatacttatgtgtacctttctccacatcta
aggcattttctacacagggagccaccttcattgtctgaagctgctcttcttgcatgtctt
aagcctccagtctcgaaagcagtcttataccaagctttagaggttaccaaggacacagga
aacgttttactgaagggtgatggtaaaaaagaacagacattacctggtggaaaatatcct
gctacgacacaaagtgggccctctgccactctggaagatgctgtaaggttgagaacatct
aatttgtctggcaatgtgtctttggacatcaaagactcaatttcttcagataaatcgtta
tattatggctacgcaccacatgcatctactgtgagcagttcattttatgatggattgtct
aagggaattccatcatattcggttaccactgataagcgtggtttaggagaaatatttatg
ccctgggaatccaaccggcatccaggtttatcaagttcagttcaaggcctccagactaga
gagaatcatttcagtagcaggcatggtgatttaagcatcagtgactcaatgaagagcagc
ttgtctgtgccaggtgatggcgtctccaactctgagactgcagtgtcgccctccttcacc
agatcagcagtggctctggagacaggttggaagcctcgtggagttctagttgcacatctc
caagaacatcggttgtctgtcaatgatattgcggtgtcagatgacaacaccttttttgtg
acggcttcggatgactcaagtgttaagatatgggatacaagaaagttggaaaaggacatt
gccttcagatcaaggttgacatataacttgggtagtagccaagctctatgtacaacaatg
ctttctggcagttcacaggttgttgttggtgatagtgatggcgcattgcacttgttttct
gttgactgcgcacgcggtgttgggagtgttgcagagaggtattctggcatcgttaacgta
aaaaggaaagatctgaaagaaggtgctattctcagtgttgcaaattgttcatcggacagc
tttagcccaaccatcctattcagcactgaacattgtgacatccataaatgggatgcaagg
accaattcagaatcttggtcatttaaatcctcaccggaggagggctatatctcagcgctt
gtgatgggccagtgtggaaattggttcatctcagggtcttcaagaggtgttcttacgttg
tgggatcataggtttttgcttcctgtcaactcatggaactattccacagtaacccctata
gagaaattgtgcttgcttataccaccacacaactcaatatcttctgctggaagaccactg
gtttttgtggccgcaggctacaatgaagtttccttgtggaatgctgagaatggtagctgc
caccagatgtttaggacagcaagcatcgagaatgaggctgttatgccgaagacaccatca
agacctgttaacaagacaaacgccaaagacataaggcgagcgggaagctacaaatacaga
attgaggaattatctagtccgcctccacgccttccaggcatccgttgcttgcttcctttg
ccagggggagatctgttgactggaggaacagatttgaagatacgctattgggaccaggcc
agacctgagcaaagcttctgcattgctggcccttcagcgaaaggagttggaaatgatgag
tgctatgatataaaatccagctacggtgtacaggttgtacaggaaacgtgtaagcagcct
acgccatcatccaggttgacgcacaagacgcagctcgcgatggctgctgccgattccgct
ggctgccaccgggacgccatcctcgcgttggcatctgtcaacctgtcgagccagaggttg
atatcggccagcagagacggtgccgtcaaagtgtggaaatag
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