Lolium rigidum (rigid ryegrass): 124693451
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Entry
124693451 CDS
T09103
Name
(RefSeq) homeobox-leucine zipper protein ROC1-like
KO
K09338
homeobox-leucine zipper protein
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124693451
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
124693451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
DciA_cyano_C
Motif
Other DBs
NCBI-GeneID:
124693451
NCBI-ProteinID:
XP_047082883
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All DBs
Position
2:complement(272695089..272699941)
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AA seq
803 aa
AA seq
DB search
MTPARRLPPMIGRSSVAYGSAAALGLTQADLLDSHHLHQALIQQQLFEQIPAAMTTAAAV
DSGSADHMLHSRGTSDALLAPDELESKSCSENVDGGGGGGGSGEEDDEQDPNQRPRKKKR
YHRHTQHQIQELEAFFKECPHPDDKQRKELSRELNLEPLQVKFWFQNKRTQMKNQHEKHE
NSQLRADNDKLRAENMRYKEALSSASCPSCGGPAALGEMSFDEHHLRVDNARLRDEIDRI
SGIAAKHVGKPMVSSPFLPAGMLSGSLAAVAARSPLDLVGAYGGGGDMFGGDMLRSVSRG
GGQIIDVDKPMIIELAVAAMDELIQMARLDEPLWSARPGDGIPVAAEALDEEEYGRVFPR
GLGPRQYGLKPEASRGSAVVIMTHGSLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAG
NYDGALQVMSMEFQVPSPLVPTRESYFVRYCKHNPDGSWAVVDVSLDSLRQSPVVKCRRR
PSGCIIQELPNGYSKVTWVEHVEVDDRSVHNIYKPLVNSGLAFGARRWVGTLSRQCERLA
SAMASSIPNGDLGVITSVDGRKSMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRV
MTRKSVDDPGRPPGIVLNAATSFWLPVTPSTVFDFLRDETSRSEWDILSNGGVVQEMAHI
ANGRDHGNCVSLLRVNSANSNQSNMLILQESCTDASGSYVVYAPVDIVAMNVVLNGGDPD
YVALLPSGFAILPDGPPPSATQGPENSTGGGGSLLTVAFQILVDSVPTAKLSLGSVATVN
SLIACTVERIKAAVCRDTASNPQ
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggccagacgcctgccgccgatgatcggccggagcagcgtggcgtatgggtcg
gcagccgcactgggtctgactcaggctgacttgctggacagccaccatctgcatcaagca
ctaatccagcagcaactcttcgagcagatcccggcagccatgacgacggcggcagcggtg
gacagcggcagcgccgaccacatgcttcatagccggggcacctccgatgcgctgctggcg
cctgacgagctcgagagcaagtcgtgcagcgagaacgtcgacggtggtggtggtggcggc
ggctctggcgaggaagacgacgagcaggatcccaaccagcgtccccgcaagaagaagcgg
taccaccgccacacacaacaccagatccaagagctcgaagcgttctttaaggagtgccct
catccggacgacaagcagcggaaggagctcagccgggagctgaacctggagccgctgcag
gtcaagttctggttccagaacaagcgcacacagatgaagaaccagcacgagaagcacgag
aactcgcagctgcgcgccgacaacgacaagctccgcgcggagaacatgcggtacaaggag
gccctgagcagcgcgtcctgccccagctgcggcgggccggcggcactgggcgagatgtcc
ttcgacgagcaccacctccgcgtcgacaacgcgcgcctccgcgacgagatcgacaggata
tctggcatcgcggccaagcacgtcgggaagcctatggtgtcatccccctttctcccggcg
gggatgctctccggctcactcgccgccgtcgctgcgcgctccccgctcgacctagtcgga
gcctacggcggcggcggggacatgttcgggggcgacatgctgaggagcgtgtcccgaggc
ggtggccagatcatcgacgtggacaagcccatgatcatcgagctggccgttgccgccatg
gacgagctcatccagatggcacggctcgacgagccgctctggagcgcacgccccggcgac
ggcatcccggttgcggccgaggcgctggacgaggaggagtacggccgcgtgttcccgagg
gggcttggcccgaggcagtacggtctcaaaccggaagcctcccgcggcagcgccgtcgtg
atcatgacccatggcagccttgtcgagatcctcatggacgtgaatcaattcgcgacggtg
ttctcgagcatcgtgtcccgggcttctacgcacgaggtgctgtccaccggcgtggcaggg
aactacgacggagcattgcaagtgatgtcaatggagttccaagtgccgtcgccattggtg
ccaacgcgtgagagctacttcgtgaggtactgcaagcacaatcccgacgggtcgtgggcc
gtggtggacgtctccctggacagcctgcgccagagcccagtcgtgaaatgccgacgcagg
ccttccggctgcattatccaagaattgcccaacggctactcaaaggtgacatgggtggag
catgtggaagtggacgacaggtcggtgcacaacatctacaagcctctggtgaactctggc
ctggcgttcggcgcgaggcggtgggtgggcacgctgagccggcagtgcgagcgcctcgcc
agcgccatggccagcagcatccccaacggcgatcttggcgtgatcacgagcgtggacggg
aggaagagtatgctgaagctggcggagcggatggtggccagcttctgcggcggcgtgacg
gcgtccgtggcgcaccagtggacgacgctgtcgggcagcggcgccgaggacgtgcgcgtc
atgaccaggaagagcgtcgacgaccccgggaggccgccggggatcgtgctcaacgccgcc
acctcattctggctccccgtcacgcccagcaccgtcttcgacttcctccgcgacgagacc
tcacgcagcgagtgggacattctctccaacggcggcgtcgtccaggagatggctcacatc
gccaacggccgcgaccacggcaactgcgtctccctccttcgtgttaacagcgccaactcg
aaccagagcaacatgctgatcctgcaggagagctgcacggacgcgtcggggtcgtacgtg
gtgtacgcgccggtggacatcgtggccatgaacgtggtgctcaatggcggcgacccggac
tatgtggcgctcctgccgtcgggcttcgccatcctgcccgacgggcctccgccgtcagca
acccaagggcctgaaaactcgacggggggtgggggctccctcctcacggtggcgttccag
atactggtggactccgtcccgacggcgaagctctcgctgggctccgtcgccaccgtgaac
agtctcatcgcctgcaccgtggagcgcatcaaggccgccgtctgcagggacacggccagc
aatccgcagtag
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