Lolium rigidum (rigid ryegrass): 124693632
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Entry
124693632 CDS
T09103
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124693632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124693632
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
124693632
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
124693632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
CTC1_7th
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
124693632
NCBI-ProteinID:
XP_047083075
LinkDB
All DBs
Position
1:complement(267321540..267327296)
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AA seq
714 aa
AA seq
DB search
MTTSNKPISLAGPVDADVLRTAELNKFLVDAGLYETVEESARREEVLGELDKIVKDWVKQ
LTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDIL
SQTEEVTHLQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQESVLYEIDEAT
VRSLTGCRVADQILRLVPNIENFRTTLRCLKHWAKRRGVYSNVTGFLGGVNWALLVARVC
QLYPNAVPSMLVSRFFRVFTQWHWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIIT
PAYPCMNSSYNVSTSTLRVMIEQFQFGNKICQEIELNKANWSALFEPFNFFEAYKNYLQV
DIIAEDDADLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPSEYADPSRQCAHCAFFMG
LSRKEGVKIQEGQAFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYR
RPRPQRHVNHHQQSGKNATENGTLTGSPDGQLKRKHASDGVNDTEPCRSVKRASVSPVHP
KTSSPLSGSPVQPKTSSPLSGNVSDDPTSNNQTKDTSNASGGSQDSPSSGNEEQAKCSSS
SQASEKSLDSIPSGSKCVKVEAACSGDVTSKQANCISHVNDNTAPAVVVSTTLKRVAEKV
VLELVGSESLGGNNADLLHITEKDMGNVLAEKVHFGGNGVSQSGLHEELELMQV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttctaataagccgatttcgctggctgggccggtcgacgccgatgtgctcagg
acagcggagttaaacaagttcttggttgatgctgggctatatgaaaccgtggaggagtcg
gccaggcgagaggaggtgctgggggagcttgacaagattgtcaaagactgggtgaagcag
ttaactagtcagagggggtacaccgatcaaatggtcgaagaggcaaatgccgtgcttttc
accttcgggtcgtaccgtcttggggtccatggacctggggctgatatcgacacgttatgt
gttgggccttcttatgtgaatcgtgaggaggacttctttattgtactgcatgacatatta
tcgcaaacagaggaagtgactcacctccaacctgtacctgatgcacatgtccctgttatg
aaatttaaattccatgggatatcaattgaccttctttatgccagcgtttctctcttagtt
gtaccatctgatttggatatctctcaggaatcagtgctttatgagattgatgaagctact
gttcgcagtcttactggctgcagagtggctgaccaaattcttaggcttgttccgaatatt
gagaacttccgaacaacactaaggtgtttgaagcattgggcaaaaagaagaggtgtttac
tcaaatgttactggttttcttggaggtgtcaattgggcattactggttgcacgtgtctgc
cagctctatcctaatgctgtaccaagtatgctggtctcgagattcttcagagtcttcacc
cagtggcactggccaactccagtgatgctgtgtgctattgaagaggaggagcttggtttt
cctgtctgggacccgcgcaagaatcctcgtgatagaactcatcatatgcccattatcacc
ccagcatatccatgcatgaactctagctacaatgtatcgaccagcacactgagggttatg
atagagcaatttcagtttggcaataaaatatgccaggaaattgagctgaataaggctaat
tggtctgccctttttgaacctttcaatttctttgaggcatataaaaattatctacaagtt
gacatcatcgccgaagatgatgcggatcttagactttggaagggatgggtggagtctcgg
ttaaggcaactgactttaaagattgaacgggatacatatgggaagttgcaatgccatcct
tacccatcagagtatgcagatccttctagacagtgtgctcattgcgctttcttcatgggt
ttatcaaggaaagaaggtgtgaaaatacaagaaggtcaagcgtttgatatacgtgggaca
gttgatgagtttaggcatgaaatcaacatgtatatgttctggaagcctgggatggagttg
gctgtttctcatgttcggaggaaggaaattcctgcttatgtattcccagaaggatacagg
cgacctcgtcctcagaggcatgtgaatcatcatcaacagtctggtaaaaatgcaactgag
aatggcacattgactggatctccagatggtcagctaaagaggaagcatgcttctgatgga
gtgaatgatactgaaccttgcagatctgttaagagggcttcagtcagcccagttcaccct
aaaacttcatcaccactgtctgggagcccggttcaacccaaaacttcatcacctctgtct
gggaatgttagtgacgatcccacaagcaacaaccaaaccaaagatacttctaatgcaagc
ggtgggagtcaggattcccctagcagtggcaatgaagaacaagcaaagtgttcaagttca
tcacaggcatctgagaaaagcttggattcgatcccatcaggatccaaatgtgtgaaagtg
gaagctgcctgttccggtgacgtgaccagcaagcaagcaaactgtatttcacatgtcaat
gacaacactgctccagctgtcgtagtcagtacaactttaaagcgtgttgctgagaaggtt
gtattggagctcgttggaagtgaaagcttgggtggcaataatgcagatttactgcacatc
acagaaaaggacatgggaaatgtccttgctgaaaaagtccacttcggtgggaacggagtt
tctcagagcggcctccatgaagagctagagctcatgcaggtgtga
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