Lolium rigidum (rigid ryegrass): 124694173
Help
Entry
124694173 CDS
T09103
Name
(RefSeq) protein FIZZY-RELATED 2-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124694173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124694173
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
124694173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Tricorn_2nd
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
MIOS_WD40
Peptidase_M10_C
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_VPS8
WD40_RFWD3
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
124694173
NCBI-ProteinID:
XP_047083146
LinkDB
All DBs
Position
3:complement(2217786..2221960)
Genome browser
AA seq
502 aa
AA seq
DB search
MEHHQHPPSPSAADPNSKPPTPSSTHAARLPPGAQSSWPPSSPSGATTRAAASSASSAPS
TPASRTVYSDRFIPSRAGSNLALFDLPPAGAGGSAAASPYCTLLRAALFGPDTPDRLASS
AAASSPSSPSPASGNIFRFKAEVPRNAKRALFAGGTDDDDLRFPGIFTAKGAGPRKIPRS
PYKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGAEDTVCSV
GWAQRGTHLAVGTNQGKVQIWDASRCKRMRTMESHRMRVGALAWNSSLLSSGSRDKNILH
HDLRAPDDYVSKLTGHKSEVCGLKWSYDNRQLASGGNDNRLFVWNQHSTQPVLKYTEHTA
AVKAIAWSPHLNGLLASGGGTADRCIRFWNTTTNTHLSSMDTGSQVCNLVWSKNVNELVS
THGYSQNQIIVWRYPTMSKLATLTGHTFRVLYLAISPDGQTIVTGAGDETLRFWNVFPSP
KSQSADSLSSIGGTSFVRSYIR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggagcaccaccagcacccgccgtcgccgtcggcggcggaccccaactcgaagccgccg
acgccgtcctccacccacgccgcgcgcctccccccgggggcgcagtcctcctggccgccc
tcctccccgtccggcgccacaacgcgcgcggccgcgtcttccgcgtcctcggcgccgtcc
acgcccgcctcgcgcaccgtctacagcgaccgcttcatccccagccgcgccggatccaac
ctcgcgctcttcgacctcccgcccgccggcgccggcggatccgccgccgcgtcgccctac
tgcacgctcctccgcgccgcgctcttcgggcccgacacgcccgaccgcctcgcctcctcc
gccgccgcctcctccccttcctccccctcccccgccagcggcaacatattcaggttcaag
gccgaggtgccgcggaacgccaagagggcgctcttcgccggcgggaccgacgacgacgac
ctccgcttcccaggcatcttcaccgccaagggcgccgggcccaggaagatcccgaggtcg
ccgtacaaggtgctagatgcgcccgcattgcaggacgacttctacctaaacctggtggat
tggtcttcgcacaatgtcctcgctgttggattggggaattgcgtctatctgtggaatgcc
tgcagcagcaaggtcaccaagctctgcgatttgggggcggaggacacggtttgctccgtg
ggctgggcgcagcgtggcactcaccttgccgtagggactaaccaaggcaaagttcagata
tgggatgcatcacgatgtaagagaatgcgaaccatggaaagccatcgcatgcgagttggt
gctcttgcatggaactcttcattgctttcttctggcagtcgcgacaaaaacatccttcac
catgatctccgtgctccagacgactacgttagcaaacttactgggcataaatctgaggtt
tgtgggctcaagtggtcgtatgataaccgtcagcttgcttctggtggcaatgacaacaga
ctttttgtttggaaccaacattcaacacaacctgtgctgaagtatactgagcacacagca
gctgtgaaagctatcgcttggtcacctcatctaaatggccttcttgcatctggtggagga
actgcagatagatgcatacgtttttggaatacgaccactaatacgcacttgagttccatg
gacacaggaagtcaggtctgtaatcttgtgtggtccaagaatgttaatgagcttgttagc
acacacggatattctcagaatcagataattgtgtggcggtatccaacaatgtcaaagctt
gccacattgacaggccatacattcagagtattatatttagccatctcccctgatggacag
actattgttaccggtgctggtgacgagacactgcggttttggaacgtgtttccgtctccc
aagtcccagagtgctgacagcttaagtagcatcggaggcacatcatttgttaggagctac
atccggtga
DBGET
integrated database retrieval system