Lolium rigidum (rigid ryegrass): 124694197
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Entry
124694197 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124694197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124694197
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124694197
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
SET_assoc
RRM_3
RRM_5
DUF2129
Motif
Other DBs
NCBI-GeneID:
124694197
NCBI-ProteinID:
XP_047083170
LinkDB
All DBs
Position
3:complement(4575096..4577123)
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AA seq
271 aa
AA seq
DB search
MRPVFCGNFDFDTRQSDLERLFSKYGPIRRIDIKSGYAFIYFEDERDAEDAIRRLDKADF
GHGRRRLSVEWSRQEEPVPKNRDRPTGDAVKPTRTLFVINFDPLRTKIRDIEEHFEPYGK
ISNIRIRKNFAFVRYETLEEASAAVKKTDKSTILDRVVTVEYAFRDDDNERDDRYGDPKQ
GNERYGSPKRGNDRYSGPKRGDDRYGSPGRVRRRGSPYMRSPSPRYQRDYSPDYHPRNPG
YDRRDGAPYRRSRSPVYARYDRGRSPGYGRY
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtgttctgcggcaacttcgacttcgacacgcgccagtccgacctcgagcgc
ctcttctccaagtacggccccatccgccgcatcgacatcaagtccggctacgctttcata
tacttcgaggacgagcgcgatgcagaggatgcaataaggcggctcgacaaagccgacttc
ggccatggcaggcgcaggctctccgtagaatggtcaaggcaagaggagccagtgcccaag
aaccgcgacaggccgacaggggacgccgtgaagccgacgaggaccctcttcgtcatcaac
ttcgaccccctccgcaccaagattcgggacatcgaggagcatttcgaaccgtacggcaag
atctcaaacatccgcatcaggaagaactttgcgttcgtgcggtatgagacgctagaggaa
gccagtgcggctgtcaagaagaccgacaagagcacaatattggacagggtggtgacagtt
gaatatgctttccgggatgatgacaatgaaagagatgacagatatggagatcccaaacaa
ggcaatgaaagatatggcagtcccaaacgaggcaatgacagatacagtggtccaaaacga
ggcgatgacagatatggaagtccaggaagagtgaggcggcgcggtagtccttacatgcgc
tcccctagcccaaggtaccaaagggattacagtccagattaccatccacgtaaccctgga
tatgaccgccgtgatggagcaccataccgtaggagcagaagccctgtctatgctcgttac
gacaggggcagaagccccggctatggtcgttactag
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