Lolium rigidum (rigid ryegrass): 124694269
Help
Entry
124694269 CDS
T09103
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124694269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124694269
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124694269
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124694269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
124694269
NCBI-ProteinID:
XP_047083231
LinkDB
All DBs
Position
3:7377862..7380281
Genome browser
AA seq
334 aa
AA seq
DB search
MAKFSFADAADEDHPPAPSPAPAADTTDAGGCDKRKRDGVGGPHDSAVGGGPPSKARKLD
GVGGERAVKGEGGCGREVRRVGGDGDAGISMRIDPDLLDCSICFEPLCPPLYQCQNGHVA
CFSCWSRLSNKCHVCSHDAIFARNIALEKIVESIKSSCAYAKWGCCNLVSYAQRTTHEEA
CLFAPSTCPIPGCGYRGFTGCWSGHFLVDHSADCLHFVYGQPFEVNLEVSLPFLVLLGED
DHLFLLLNKNMMPFGHAFTVVCLRTGNLNWKFSYEIKTASGGNPENSMQLKASVTNTKEW
ADVHPSEAFLLVPYDFCSSTNLTLHVTVARSASV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttctccttcgccgacgctgccgacgaagaccatcctcccgccccctccccc
gcccccgccgcagacaccaccgacgccgggggctgcgacaagaggaagcgtgacggcgtc
ggcggccctcacgacagcgcggtcggtggcggaccaccgtccaaggcccggaaattggat
ggcgtgggcggggagcgggcggtcaagggggaaggcgggtgcggtcgggaggtgcggagg
gtcggcggggacggcgacgcggggatcagcatgcggatcgacccggacttgctcgactgt
tccatctgcttcgagcccctctgccctcccctctaccagtgccaaaacggccacgtagca
tgcttttcctgctggtcaaggctcagcaacaagtgccatgtttgttctcacgatgctatc
tttgcacgaaacatcgcgctggagaagatcgtcgagtcaatcaagtcctcctgcgcatac
gccaagtggggctgttgcaacctggttagctatgcgcagagaaccacccacgaagaagcc
tgcctctttgccccttcgacgtgccctattcctggctgtggatatagaggcttcactgga
tgttggtcaggtcacttccttgtcgaccatagtgctgattgcttgcatttcgtctatggc
cagccctttgaagtgaatcttgaggtgtccctgccttttctagttcttcttggagaggac
gatcacctattcctgcttctgaacaagaacatgatgcccttcgggcacgcatttacggtg
gtttgtctgaggaccggtaatctgaattggaaattctcatatgaaattaaaacagctagt
ggagggaaccctgaaaactccatgcagctgaaggcttctgtcacaaatacaaaggagtgg
gccgatgtgcacccttcagaagcatttctcctggttccatatgatttctgcagttctacc
aacctaacccttcatgtcactgttgcaaggtctgcctctgtatga
DBGET
integrated database retrieval system
