Lolium rigidum (rigid ryegrass): 124694714
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Entry
124694714 CDS
T09103
Name
(RefSeq) probable tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124694714
Enzymes [BR:
lrd01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
124694714
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
124694714
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
DUF3136
DNA_processg_A
Motif
Other DBs
NCBI-GeneID:
124694714
NCBI-ProteinID:
XP_047083623
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Position
3:complement(14331863..14332729)
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AA seq
288 aa
AA seq
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MSCPRWKKGKDGKDFSALAAASPMSSIVAELQSSLKRSRPVATISSHGKDAILGVSPHQA
ILLNQAAFGRFVENAGAEKQWFQLGAEEVFYLCHALKCVVVESESGKQMSEGELWDHLCS
ASESFPEMYKAYSHLRSKNWVVRSGLQYGTDFIAYRHHPALVHSEFAVVVVPEGAELGGR
CGRLKVWSDLLCALRASGSVAKTLLVLTISSSICELGSPDCLEQLFVHERTITRWIAQQC
REQRCEPCRVEPSKEEEGHTRETVVLNYWGVILGFTVLSTLLVYKLRF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgtccgagatggaagaagggcaaagacggcaaggatttctcagctctagcagca
gctagccccatgtcaagcattgttgccgagctccagtcttcactgaaacgatctagaccc
gtggcaactatatctagccacggcaaggacgctattcttggagtgagtccacatcaagct
atcctcctgaaccaagctgcctttggccggttcgtggaaaatgccggagcagagaaacag
tggttccagctgggcgccgaggaggtcttctacctttgccatgctttgaagtgcgttgtg
gtcgagtcggagagcgggaagcagatgagtgaaggggagctatgggatcacttgtgctcc
gcatcagagtcgtttcctgagatgtacaaagcatactcacatctcagatcaaagaactgg
gtagtgcggtcaggtttgcagtatggtacagattttatagcttaccgtcatcacccagcg
ctcgtacactcagagtttgccgtggttgtggttccagaaggagcagagcttggcggtagg
tgtggccgcctgaaggtgtggtccgatctactatgtgcactccgagcttccggcagtgtg
gccaagacactgctggttctgacaatctccagcagtatctgtgaactgggatcgccagat
tgtttggagcagctgtttgttcatgagaggacaattacaaggtggatagcgcagcagtgc
cgtgagcagcgatgtgaaccatgcagagtagaaccaagtaaggaagaagaaggtcacaca
agagaaactgtagtcttaaactattggggtgtaatactaggcttcacggttctttctacc
ctacttgtatacaagctgagattctga
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