Lolium rigidum (rigid ryegrass): 124694863
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Entry
124694863 CDS
T09103
Name
(RefSeq) plant-specific TFIIB-related protein 1-like
KO
K03124
transcription initiation factor TFIIB
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124694863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124694863
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
124694863
Prokaryotic type
Archaeal type
TFB
124694863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
TRAFD1-XIAF1_ZnF
Motif
Other DBs
NCBI-GeneID:
124694863
NCBI-ProteinID:
XP_047083749
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All DBs
Position
3:55540420..55549886
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AA seq
528 aa
AA seq
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MSQPSQCPYCRSSGPARCATTQPPLSRAVSECSSCARLVLERHLHTHPFFPLLPSIHPLP
LVTPDLAASASPPPNDHDDDPFLPAGFVSAFSAFSLERHPVLARSASAFSGQLAELERAL
AVDSPASSTPDPAGPMVSVDSLRAYLQIVDVASILRLHRDIADHAFDLFKECSTATCLRN
RSVEALATAALVQAIREAQEPRTLQEISTASNLPQKEIGKYIKILGESLKLRQPLNSNSI
AVHMPRFCNLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKTQ
AEICKVTGLTEVTLRKVYKELLENWDDLLPPNYTPATPPEKAFPMTNIYSARSSSGKDLY
QDKLLDSIKQKSCEAAEPDHMVIVKDEEDRKAGLLGQPPSILEAHDLNQACWQQNVPFSA
SSKSDRDNTETSVRGFNLNEESCPMDSDKADVTMKPHIADGWATEPKVLPSPPSRQPVPW
QLKQPAPATSSSYPRNREMQLGFSMDLLAGRGKRSAGDSGDGRDKEGK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccgtcgcagtgcccctactgccgctcgtcggggccggcgcggtgcgccacg
acgcagccgccgctctcgcgcgccgtctccgagtgctcctcctgcgcccgcctcgtcctc
gagcgccacctccacacccaccccttcttccccctcctcccctccatccacccgctcccc
ctcgtcacccccgacctcgccgcctccgcctccccgccccccaacgaccacgacgacgac
cccttcctccccgccggcttcgtgtccgccttctccgccttctccctcgagcgccacccc
gtcctcgcccgctccgcctccgccttctccggccagctcgccgagctcgagcgcgcgctc
gccgtcgactcccccgcctcctccaccccggaccccgccgggcccatggtctccgtcgac
agcctccgcgcctacctccagatcgtcgacgtcgcctccatactcaggctccaccgggac
atcgcagaccacgccttcgacctcttcaaggagtgctccaccgccacctgcctcaggaac
cgtagcgtcgaggcgctcgccaccgccgcgctcgtccaggccatccgcgaggcgcaggag
cccaggacactgcaggaaatctctactgctagcaatcttcctcagaaagaaataggaaaa
tacatcaagatacttggtgaatctttgaaactgaggcaacctcttaacagcaattcaata
gcagttcacatgcctcggttttgtaacctgctccagctcaataaatcagctcaggaactt
gcagcccacattggtgaggtagttgtcaacaaatgcttctgcacacggcggaaccccata
agcatatctgctgctgctatctaccttgcatgtcagctcgaagacaagcgcaagactcaa
gcagagatctgtaaggtaacaggccttacagaggtcactcttcgtaaagtgtataaagaa
ctcctggagaactgggatgatctgctaccgccaaactacacaccagccacgccaccagag
aaagctttccccatgacaaacatatactcagcacgctcatcgagtggaaaagatctttat
caggataagctgctggatagtatcaagcaaaaaagctgtgaagccgcagagcctgatcac
atggtaattgtaaaagatgaggaagacaggaaagccggcctacttggtcaacctccttcg
atactcgaggcccatgacctgaaccaggcatgctggcagcagaatgttccgttttcagca
tcttcaaaatcggaccgcgacaatacggagacaagcgttcgtgggtttaaccttaacgag
gagtcatgtccaatggattctgacaaggcagatgtaacaatgaagccacacattgctgat
gggtgggcaactgaaccgaaggtgcttccatctcctcccagtaggcagcctgtaccatgg
cagcttaagcaaccggcaccagcaactagttcatcgtatcctaggaatcgtgagatgcag
ctgggctttagcatggaccttctggctggacgtgggaaaaggagtgctggggatagtggt
gatggccgtgataaagagggcaagtga
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