Lolium rigidum (rigid ryegrass): 124694917
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Entry
124694917 CDS
T09103
Name
(RefSeq) plant-specific TFIIB-related protein 1-like
KO
K03124
transcription initiation factor TFIIB
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124694917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124694917
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
124694917
Prokaryotic type
Archaeal type
TFB
124694917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
TRAFD1-XIAF1_ZnF
Motif
Other DBs
NCBI-GeneID:
124694917
NCBI-ProteinID:
XP_047083795
LinkDB
All DBs
Position
3:complement(62488461..62495014)
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AA seq
529 aa
AA seq
DB search
MSQPSQCPYCRSSGPARCATTQPPLSRAVSECSSCARLVLERHLHTHPFFPLLPSIHSLP
LVTPDLAASASPPPNHDDDDDPFLPAGFVSAFSAFSLERHPVLARSASAFSGQLAELERA
LAVDSPASSTPDPAGPMVSVDSLRAYLQIVDVASILRLDRDIADHAFDLFKECSTATCLR
NRSVEALATAALVQAIREAREPRTLQEISTASNLPQKEIGKYIKILGEALKLRQPLNSNS
IAVHMPRFCNLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKT
QAEICKVTGLTEVTLRKVYKELLENWDDLLPPNYTPATPPEKAFPMTNIYSARSSSGKDL
YQDKLLDSIKQKSCETAEPDHMVIVKDEEDRKAGLLGQPPSILEAHDLNQACWQQNVPFS
ASSKSDRDNTETSVRGFNLNEESCPMDSDKADVTMKPHFADGWPTEPKVLPSPPSRQPVP
WQLKQPAPATSSSYPRNREMQLGFGMDLLPGRGKRSAGDSSDGRDKQGK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccgtcgcagtgcccctactgccgctcgtcggggccggcgcggtgcgccacg
acgcagccgccgctctcgcgcgccgtctccgagtgctcctcctgcgcccgcctcgtcctg
gagcgccacctccacacccaccccttcttccccctcctgccctccatccactcgctcccc
ctcgtcacccccgacctcgccgcctccgcctccccgccccccaaccacgacgacgacgac
gaccccttcctccccgccggcttcgtgtccgccttctcggccttctccctcgagcgccac
cccgtcctcgcgcgctccgcctccgccttctccggccagctcgccgagctcgagcgcgcg
ctcgccgtcgactcccccgcctcctccaccccggaccccgccgggcccatggtctccgtc
gacagcctccgcgcctacctccagatcgtcgacgtcgcctccatactcaggctcgaccgc
gacatcgcagaccacgccttcgacctcttcaaggagtgctccaccgccacctgcctcagg
aaccgcagcgtcgaggcgctcgccaccgcagcgctcgtccaggccatccgcgaggcgcgg
gagcccaggacactgcaggaaatctctactgctagcaatcttcctcagaaagaaatagga
aaatacatcaaaatacttggtgaagctttgaaactgaggcaacctcttaacagcaattca
atagcagttcacatgcctcggttttgtaacctcctccagctcaataaatcagctcaggaa
cttgcagcccacattggtgaggtagttgttaacaaatgcttctgcacacggcggaatcct
ataagcatatctgctgctgctatctaccttgcatgtcaactggaagacaagcgcaagact
caagcagagatctgtaaggtaacaggccttacagaggtcactcttcgtaaagtgtataaa
gaactcctggagaattgggatgatctgctaccgccaaactacacaccagccacgccacca
gagaaagctttccccatgacaaacatatactcagcgcgctcatcaagtggaaaagatctt
tatcaggataagctgctggatagtatcaagcaaaaaagctgtgaaactgcagagcctgat
cacatggtaatcgtaaaagatgaggaagacaggaaagctggactacttggtcaacctcct
tcgatactcgaggcccatgacctgaaccaggcatgctggcagcagaatgttccgttttca
gcatcttcaaaatcggaccgtgacaatacggagacaagtgttcgtgggtttaaccttaac
gaggagtcatgtccaatggattctgacaaggcagatgtaacaatgaagccgcactttgct
gatggatggccaactgaaccgaaggtgcttccatctcctcccagtaggcagcctgtacca
tggcagcttaagcaaccggcaccagcaactagttcatcgtatcctaggaatcgtgagatg
cagctgggctttggcatggaccttctgcctggacgtgggaaaaggagtgctggggatagt
agtgatggccgtgataaacagggcaagtga
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