Lolium rigidum (rigid ryegrass): 124695035
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Entry
124695035 CDS
T09103
Name
(RefSeq) protein argonaute PNH1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124695035
03036 Chromosome and associated proteins [BR:
lrd03036
]
124695035
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124695035
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124695035
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124695035
microRNA pathway
RISC loading complex
124695035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
124695035
NCBI-ProteinID:
XP_047083891
LinkDB
All DBs
Position
1:complement(283160259..283166422)
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AA seq
966 aa
AA seq
DB search
MLEVLEMAPPPPPPRQPAAASRGRGKGHAGQPRKQPLQASVTQPKAETPAAAAVPPPEAA
KKCGGRRRGGRGRATRPVDPRPAPGPAVAAPATATTRAVVIGPPVSSKGLAFCRRPGFGT
VGARCVVKANHFLAEVPDKDLTQYDVKITPEVSSRYVNRAIVAELVRLYRDSDLGARLPA
YDGRSSLYTAGALPFDAREFVVRLADDDTGTGVPPREREYRVAIKFAARADLHHLREFIA
GRQATAPQEAVQVLDIVLRELANQRYVPIGRSFYSPDIRKPQRLGDGLQSWCGFYQSIRP
TQMGLSLNIDMSSTAFIEALPVIEFVAQILGKDVMSRPLSDANRIKIKKALRGVKVEVTH
RENVRRKYRITGVTAQPTHELIFPIDDQMNMKSVVEYFKEMYGFTIQQSHLPCLMVGNQK
KANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCQRPREKEMDILQTVHQNGYDQDPYA
KEFGINISEKLTSVEARVLPAPWLKYNDAGKEKECLPQVGQWNMVNKKVINGGKVSHWAC
INFSRSVQETTARGFCQELAQMCQISGMEFNSEPVLPIYSARPDQVAKALKHVYNVALHK
LKGKELELVLAILPDNNGALYGDIKRICETDLGLITQCCLTKHVFKISKQYLANVSLKIN
VKMGGRNTVLVDALSWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTK
YAGLVCAQAHRQELIQDLYKTWHDPQRGTVTGGMVRELLISFRKATGQKPQRIIFYRDGV
SEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSMDKSGN
ILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEMQTLTNNLCYT
YARCTRSVSVVPPAYYAHLAAFRARFYLEPELSENHTSKSSSGTNGTSVKPLPAVKEKVK
RVMFYC
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggtcctggagatggcgccgcccccgccgccgccgcgccagccggcggcggcg
tcccggggacgcgggaagggacacgcgggccagccgcggaagcagccgctgcaggccagc
gtgacgcagcccaaggcggagacgcctgccgcggcggcggttccgccgccggaggcagcc
aagaagtgcggcgggaggcggcgcggcgggcgcgggcgcgccaccaggccggtggacccg
cggccggcgccggggcccgcggtggcggcgcctgcgacggcgacgacgcgcgccgtcgtc
attgggccgccggtgagcagcaaggggctggcgttctgccggcggcccgggttcgggacg
gtgggtgcgcgctgcgtcgtcaaggccaaccacttcctcgccgaggttcccgacaaggac
ctcacccagtacgacgtgaagatcacgccggaggtgagctcccggtacgtgaaccgggcc
atcgtcgcggagctggtgcgcctctaccgggactccgacctcggggcgcgcctcccggcc
tacgacggccgcagcagcctctacaccgcgggcgccctcccgttcgacgcgcgcgagttc
gtggtgcgcctcgccgacgacgacaccggcaccggcgtgcccccacgcgagagggagtac
agggtcgccatcaagttcgccgcgcgcgccgacctgcaccacctccgggagttcatcgcc
ggccggcaggccaccgcgccgcaggaggccgtccaggtgctcgacatcgtcctccgggag
ctcgccaaccagaggtacgtgccgatagggcggtccttctactcgccggacataaggaag
ccgcagaggctcggcgacggcctgcagtcgtggtgcgggttctaccagagcatccggccg
acgcagatgggcctctcgcttaacatcgatatgtcgtccaccgcgttcatcgaggcgctg
ccggtgatcgagttcgtggcccagatattagggaaggatgtcatgtcaaggccactgtcg
gatgcaaacagaattaagatcaagaaagcgttgcggggtgtgaaagttgaagttactcac
cgggaaaatgtaaggcggaagtaccgcattaccggggtgacagcacaaccaactcatgaa
ctgattttcccaattgatgatcaaatgaatatgaagtctgtcgtagagtatttcaaggaa
atgtacgggttcaccattcagcagtcacatcttccatgcctcatggtgggaaaccaaaag
aaagcaaactatctaccaatggaggcctgcaagattgtagagggtcagagatacacaaag
aggttgaatgaaaagcagatcacatcactactgaaggttacatgccaaaggcctagagaa
aaggagatggatattctacagacagttcatcaaaacggatatgaccaagatccttacgca
aaggaatttgggattaacatcagtgagaagctaacatctgttgaagcgcgtgtccttccc
gcaccttggctgaaatataatgatgctggaaaggaaaaagagtgtctgccgcaggttggt
caatggaacatggttaacaagaaagtaatcaatggaggcaaagtaagtcactgggcatgt
ataaacttctcaaggagtgttcaagaaaccactgcgcgcggattctgccaagagttggca
cagatgtgccaaatttcgggcatggaattcaacagtgaacctgtgctaccaatatattca
gctagaccagatcaagtagcgaaggcgctaaagcatgtgtataatgtagcactacacaaa
ctcaagggtaaagaacttgagcttgttttggctattctccctgacaacaatggtgcttta
tatggtgacatcaaacgtatctgtgaaactgatttggggttgataacacaatgttgctta
acgaagcatgtttttaagatcagcaagcagtacttggcaaatgtctcgcttaaaattaat
gttaagatgggaggaagaaacactgtgctcgtggatgcgctaagttggaggattccattg
gtcagtgacataccaactatcatttttggtgcagatgttacacatcctgaaaccggggag
gactctagtccatccattgctgcagtcgtcgcttctcaagactggccagaagtcacaaaa
tatgccggattggtatgtgcgcaggcacatcggcaagagcttattcaggacctatacaag
acatggcatgatcctcagagaggcacagtaacaggaggcatggtcagggaactcttaata
tccttcaggaaggccactggacagaaacctcaaagaataattttctaccgggatggggtt
agtgaaggtcaattctaccaagttctcctatatgagttagatgctatccgtaaggcttgt
gcatccctagaaccaaattaccaacctccagtaacatttgtggtggttcaaaagcgtcac
catacaagactgtttgcaaacaatcacaaagacagaagcagcatggacaaaagtggaaat
attttgcctggaacggttgttgattcaaagatatgccatccaacggagtttgatttctac
ctctgtagtcatgccggaatccagggaacaagtaggcctgctcactaccatgtgctctgg
gatgagaacaatttctcagcagacgagatgcagacgttgacaaacaacctttgctacact
tacgcacggtgcacgcgctctgtttctgtcgtgccacctgcatactatgcacatcttgct
gcgtttcgggcacggttctatctggagccggagctgtccgagaaccacacgtcgaagagc
tccagcgggacaaatggaacctccgtgaagcccttgcctgccgtgaaagagaaggtgaag
agagtgatgttctactgctga
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