Lolium rigidum (rigid ryegrass): 124695052
Help
Entry
124695052 CDS
T09103
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124695052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124695052
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124695052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
CAS_CSE1
DraIII
Motif
Other DBs
NCBI-GeneID:
124695052
NCBI-ProteinID:
XP_047083903
LinkDB
All DBs
Position
3:76053952..76059548
Genome browser
AA seq
334 aa
AA seq
DB search
MAPLQPSVSVPPSITASPSPIGGGVGGAAVTQGGNDLASVEQLVLDLCDPLLRENALVEL
SEKREMFQDILAPLLWHSFGTIASLLQEILSIYDALSTLTLSPGASNRVCNVLALFQCVA
SHPETRTLFLNANIPCYLYPFLNTESKTRPFEYLRLTSLGVIGALVKVDDSKVISFLLET
EIVPRCLRCMEVGSELSKTVATFIVQKILLDNLGLCYICAKPERLFAVASLLVYMVLSRP
VQPSAPARLLKHIIRCFHRLSDNPSACVTLQALLPDVLKDGTVDSFLVDDPSTRRCLQQL
LHKVTVGTVGGAPRPGLDHMSSIGYKQFSYCSSL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctctgcagccttccgtctccgtaccaccttccatcacggcatctccctctccg
atcggcggcggtgtcggcggcgctgccgtgacgcagggaggcaatgacctggcgtcggta
gagcagctggtgctcgacctctgcgaccccttgctgcgcgagaatgccctcgtggagctc
tctgagaaaagagagatgtttcaagatatcttggccccgctgttatggcactcgtttggt
acaattgcttctctactacaggaaatcttgtctatctatgacgcactttcaaccctaact
ttatcgccaggtgcatcaaaccgagtctgcaacgtacttgcactttttcagtgtgttgca
tcgcacccggagacgaggacgttgttcttaaatgctaacattccatgctacttgtacccc
ttcttgaataccgagagcaaaacaagaccctttgagtacttgcggcttactagcctgggt
gttatcggtgctcttgttaaggtcgatgatagtaaagttatcagttttctgctggaaact
gaaatagttcctcgatgcttgcgttgcatggaggtgggcagtgaactttcaaaaactgtg
gccaccttcattgtccaaaagattctgcttgacaatcttggactgtgttacatatgtgcc
aaacccgagcgcttgtttgctgtggccagtcttttagtatacatggtactttcacgccct
gttcaaccctctgctcccgcaaggttgctcaagcacataattcggtgtttccacaggtta
tctgacaatcccagcgcttgtgtgacgttgcaagcactcctccctgacgttctgaaagat
ggaacggtcgacagctttcttgtggatgatccttcaacaaggcgctgcctccagcaactg
ctacataaagttacagtcggaaccgtgggaggagctcctcggccaggcctagatcacatg
agtagtataggatataagcaatttagttattgcagttcactgtaa
DBGET
integrated database retrieval system
