Lolium rigidum (rigid ryegrass): 124695243
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Entry
124695243 CDS
T09103
Name
(RefSeq) polygalacturonase-2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Module
lrd_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124695243
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
124695243
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Insc_C
Motif
Other DBs
NCBI-GeneID:
124695243
NCBI-ProteinID:
XP_047084069
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Position
3:98779510..98784006
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AA seq
392 aa
AA seq
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METPDSQPWRKPVTTRTLSITDYGAVGDGQTDDTPAFQKTWAAACSSSKPATMLVPKEKD
FLVKQTTFSGQCKSSVKFKLDGTLVAPGRSTWPKENMNKWIMFNNVDKLTVSGEGTMDGK
GEVWWKNSCRVNKNLKCTEAPTALLLSKCNHLKVENIRLLNSQQMHMSVEDCKDVVLKHI
TIVAPEDSPNTDGIHIARTKDIQVMDCNIKTGDDCMSIETGTENLYASKITCGPGHGISV
GSLGDKNSKARVSNITINKAHLIGTTNGARIKSWQGGKGYAKDITFEDIIMDKVKNPIII
DQNYCYMDDPLQPKACKKQTSAVELSNIQFKNIRGTSGTKEAIKLDCSDTIPCHDLVLED
VKLTFSGHGKGATSTCKNAKLKKSDNVIPKTC
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggagacacctgatagccagccatggagaaagccagttaccacaagaaccctctcgatc
accgactacggagccgttggcgatggccaaactgatgacacgccggcgtttcagaaaacc
tgggccgcggcctgctcgtcatctaagccagcaaccatgctggttcccaaggagaaggac
tttctcgtcaagcagaccaccttctcggggcagtgcaagtcaagcgtcaaattcaagctc
gacggaacgttggtagctcccggacgatcaacttggccgaaggagaacatgaataagtgg
atcatgtttaacaacgttgataagctaaccgtgtcgggcgaagggactatggacggaaaa
ggcgaagtatggtggaagaactcctgccgagtcaacaagaacctcaagtgcacagaggcc
cccacggcgttgttgctcagcaagtgcaatcacttgaaggtggaaaatatcaggctctta
aacagccagcaaatgcatatgtccgtcgaagattgcaaggacgtagttctaaagcatatc
acgatcgttgcgcccgaagacagccctaataccgatggcatccacattgcccgcacgaag
gatatacaagtcatggattgcaacattaaaactggagacgattgcatgtctatcgagacc
ggaactgagaacttgtatgcctcaaagataacatgcggcccaggtcacggaatcagtgtc
ggaagcttaggtgacaaaaattctaaagctcgtgtttccaacataactattaacaaagca
cacctcattggcacgacgaatggtgcacgcattaagtcgtggcaaggaggaaagggatat
gccaaagacatcacatttgaggatatcattatggacaaggtcaagaatccaataatcatt
gatcaaaactactgttatatggatgatcctttacagcctaaggcatgcaagaaacaaact
tcggctgtggagctaagtaatattcagttcaaaaatataagaggcacgagtggaacaaaa
gaggctatcaagctagactgcagcgacaccatcccatgccatgatcttgtgctggaggat
gtgaagcttaccttcagcgggcatggcaaaggtgctacaagcacatgcaagaacgctaag
ctaaagaaatcggacaatgtcattccaaagacatgttga
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