Lolium rigidum (rigid ryegrass): 124695586
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Entry
124695586 CDS
T09103
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124695586
Enzymes [BR:
lrd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
124695586
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124695586
Prokaryotic type
124695586
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
124695586
NCBI-ProteinID:
XP_047084368
LinkDB
All DBs
Position
3:141196546..141200517
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AA seq
534 aa
AA seq
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MAVAAAAAAAATRSSWLLRGPFSSTILARCAYPRLLRTTICFSHSASASAPAPALALGAA
SLTPNTPSPPPTTCSGDGGGGMRWESTRKKRVVLRIGYVGSEYRGLQKQRELSADSTIES
VLESAIFKAGGILESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWDRDPDGI
ALANIINSNLPNNIKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKNGSTSEEVQEH
LIEFNNILKGFKGNHPFHNYTARAKYRKVLAGAHRRAKETSSTVNSISEMIVDQNTSGEG
ATSDPDEEYSDFPSILDSSAPEDNCKMDNPELPESSVQIQARWLHEPNESDRLSASHFRD
ILNFSCGDLQSSAGTQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFS
RIVLPIAPSEVLILRDNSFCTRNKQGNIVRPGIQSITESKEMKKGVTEFYRAALLPELAK
FLDLSQPPWQEWVENLDHFTGIPDPQLDEVRTAYRVWRDDYDRVKMARKSAGSG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgccgccgccgccgccgccgccgccacgaggtcgtcgtggcttctccggggg
cccttctcttccactatcctcgcacgctgcgcatatcctaggctcctccgtactaccata
tgcttctcccattctgcctctgcctccgcccccgcccccgccctcgccctcggcgccgcc
tccttaacaccaaacacgccttctcccccgcctaccacctgctccggggatgggggtggc
gggatgaggtgggagtctacgcggaagaagagggtcgtgctccgcatcggctacgttggc
agcgagtaccgaggtctccagaagcagcgggagctcagcgccgattcaaccattgagtca
gtcttggaatctgccatctttaaggcagggggcattcttgagagtaattatggaaagctg
caaaaagttggttgggaaaggagtagccgaactgataaaggggtgcattcactggctaca
atgatctctctgaagatggaaatccctgatcgagcatgggacagggatcctgatggcatt
gctcttgcgaatatcatcaactcgaatttaccaaacaatatcaaagttttcagtatcttg
cctgcacaaaggagttttgatgtaaggagggaatgcttgtaccgggagtacttctatctt
ctgcctgctgaaattattggaattaaaaatggttctacctctgaagaagtacaggagcac
ttaatcgaattcaacaacattctgaaaggtttcaagggaaaccacccatttcataattac
actgctcgtgcaaagtatagaaaagttctagcaggagcgcaccgaagggccaaagaaaca
agctcaacagtaaattccatctccgaaatgattgtggaccaaaacacttctggtgagggc
gctacttccgatccagatgaggaatactcagactttccgtcaatacttgattctagtgca
ccagaagacaactgcaagatggataatcccgaacttcctgagagtagtgtgcagattcaa
gctagatggctccatgagcctaatgaaagtgatagactaagtgcatcacacttcagagat
atcctcaacttctcctgtggagatttgcagagttcagcaggaacccaatttgtggaactg
acgatatgtggagtatcttttatgctgcatcagatccggaagatggttggcaccgctgtg
gcagtgaagcgtggactactacccaaagatatcatagaactttctctggcaaaattttcc
cgcattgttctaccgatcgccccatccgaagttctgatccttcgagacaacagtttctgt
acgaggaacaagcaaggcaacatcgttcggcctggcatccagtcgattaccgagtccaaa
gaaatgaagaagggcgtaaccgaattctacagggctgctcttctgcccgagctggcaaag
ttcttggatctgtcccagcctccgtggcaggaatgggtggagaacctggaccacttcacc
ggcataccagacccccaactggatgaagttcggacggcttacagagtgtggagagacgac
tacgaccgagtgaagatggctcgaaagagtgctggcagcggctag
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