Lolium rigidum (rigid ryegrass): 124695741
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Entry
124695741 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124695741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124695741
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124695741
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
YflT
Motif
Other DBs
NCBI-GeneID:
124695741
NCBI-ProteinID:
XP_047084516
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All DBs
Position
3:complement(159400972..159403263)
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AA seq
198 aa
AA seq
DB search
MAHFGRSGPPAIRDSFSLLVLNVSFRTTANDLFPLFDRCGDVVDIHIPRDRRTGDSRGFA
FVRYKYEDEAQRAVDKLDGRRVDGRDIMVQFAKYGPNAERIQKGRIVEEIPKPGGRPRSR
SPRPRYRDDYRDRDYRRRSRSRSADRYERDRPRDKDFRRHSLSRSVSPDYDRRHSRRRYA
YGFGSPAVFSVIPDYIHV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacttcgggcgctccgggccgccggcgattcgcgactcattctccctcctcgtc
ctcaatgtctccttccgcacgacggccaacgacctcttcccgctcttcgaccgctgcggc
gatgtcgtcgacatccacatcccccgcgaccgcaggactggggattcacgagggttcgcg
ttcgtgaggtacaagtacgaggacgaggcgcagagggccgttgacaagcttgatgggagg
agagtggatgggagggatatcatggtgcagtttgccaagtacggccccaatgctgaaagg
attcaaaagggaaggattgtggaggaaattccgaagccagggggtcgccccagaagccgc
agtccaagaccgaggtatcgagatgattaccgggacagagactacagaaggagaagccgt
agcagaagtgcagatagatatgaacgggacaggcccagagataaagacttccgtcgccat
agcttgagtcgcagtgttagccctgattatgacaggaggcatagcaggcggaggtatgca
tacgggtttggatctcctgctgttttttctgtcatacctgactacattcatgtctaa
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