Lolium rigidum (rigid ryegrass): 124695787
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Entry
124695787 CDS
T09103
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Module
lrd_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124695787
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
124695787
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Gene cluster
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
SteA-like_C
Motif
Other DBs
NCBI-GeneID:
124695787
NCBI-ProteinID:
XP_047084559
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Position
3:167865434..167867138
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AA seq
450 aa
AA seq
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MAEHPQSRRPAGRPAVTGSIVTINTHSHSIEPNHHRRSRSVLSHRGGAGTATVRPTNHRR
MSTLALSLAVLAAVFAAAAAVAEYNVVDYGARPGGGADSAGAFLAAWAAACNHTGRRGSR
PVMRVPAGRFLLSKAYFKGPCRSAAGVVVAIDGTVVAPPAVDSTAWIMFHYADGLAIRGG
TLDGQGRAHWACRADPGRKCPPGTTTLDISQSKGVSIKKVTLLDSKNVHISIYDSTGVTV
QGVRIVAPADSPNTDGIHVQLSRHVNILGTTIGTGDDCVSMGPGTSDVLIRNIKCGPGHG
ISIGSLGGEAGEEGVSNVTVEAAVLTGTQNGLRIKTWGKPNRGSVTGVVFSRVTMRGVHN
PIVVDQNYCPGHDQCPGKSSGVRISDVSYTDIEGTSATPVAVKFDCSGSNPCTGFRLSNI
RLTYEDKTAQSLCRNADGSASGVVSPRSCL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacacccgcagagccgccgtccggccggccggccggccgtaacaggctccatt
gttaccataaatacgcactcgcactcgatcgaaccaaatcatcatcgtcgatcacgatca
gtcctttcccatcgcggcggcgccggtacagcgaccgtccgtccgaccaatcacaggaga
atgagcaccctcgcgctctcgctggccgtgctggcggcggtgttcgccgctgcggcggcg
gtggcggagtacaacgtggtggactacggcgcgaggcccggcggcggggcggactcggcg
ggcgcgttcctggccgcgtgggcggcggcgtgcaaccacacggggcgccgcggatcccgg
cccgtcatgcgcgtgccggcgggcaggttcctgctcagcaaggcctacttcaaagggcca
tgccggagcgccgccggcgtggtggtggccatcgacggcaccgtcgtcgcgccgccggcc
gtggacagcacggcctggatcatgttccactacgccgacggcctggcgatccgcggcggc
acgctggacgggcagggccgcgcgcactgggcctgcagggcggaccccggccggaaatgc
ccgccaggcaccacgacgctggacattagccagtccaagggcgtgagcatcaagaaggtg
acgctactggacagcaagaacgtgcacatatccatctacgactccacgggcgtgaccgtc
cagggcgtcaggatcgtcgcgccggcggacagccccaacaccgacggcatccacgtccag
ctctccagacacgtgaacatcctcggcaccaccatcggcaccggcgacgactgcgtctcc
atggggcccggcacctccgacgtgctcatcaggaacatcaagtgcggccccggacacggc
atcagcatcgggagcctgggaggggaggccggcgaggagggggtgagcaacgtgacggtg
gaggcggcggtgctgacgggcacgcagaacggcctgcggatcaagacgtgggggaagccc
aaccgcggctccgtcaccggggtcgtcttctcgcgcgtcaccatgcgcggcgtgcacaac
cccatcgtggtcgaccagaactactgccccggccacgaccaatgccccggcaagagctcg
ggggtgcggatcagcgacgtctcgtatacggacatcgagggcacgtcggcgacgccggtg
gccgtgaagttcgactgcagcggcagcaacccgtgcaccgggttcaggctcagcaacatc
aggctaacgtacgaggataagacggcgcagtccttgtgccggaacgccgacgggtcggcg
tcgggggtggtcagcccgcggagctgcctctga
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