Lolium rigidum (rigid ryegrass): 124696225
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Entry
124696225 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124696225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124696225
03036 Chromosome and associated proteins [BR:
lrd03036
]
124696225
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124696225
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124696225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
124696225
NCBI-ProteinID:
XP_047084938
LinkDB
All DBs
Position
3:238686232..238691329
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AA seq
957 aa
AA seq
DB search
HPPVAAFGQSSSASNPFGQQTSSTNPFGTQQQPAFGQTNAATSNPFAPRPFGSPTPAFGG
AQTGTSSPFGGTSAFGQPSASAFGAAATGAFGQQPTPAFGATATGAFGQQPTPAFGSTST
GAFGQQQTPVFGSTSTGAFGQQQTPAFGSTSTGAFGQQQTPVFGSTSTGAFGQQQTPAFG
STSTGAFGQQPTPVFGSTSTGAFGQQPTPAFGSTSTGVFGQPTTPAFGSTATGAFGQPST
PAFGSGATTSNPASGSLFGQKSSFGGFGSSPNQSTTFGNNNFGTTTTPTFGASTSTSLFG
APGTSTFGSTTTPGFGSSPSFGQSGAATSSTLFGTTPSSPFGLPTAPPTFGQTTFGNQSG
GTRIQPHVQTPDPDGATSGSQASKLDSISAMPAYKEKSHEELRWEDYQRGDKGGPNTTPV
VNNFSPSPQPSFPISQPAPVNPFSSISNSTGAFGTTPSLFPSPGTTLFGQSTGSPFQANT
SQSLFANTTPSIFGSSSAITTPFSFGPSFNNNSQSAGLFPSLSSPAIGQQPSSHSFNQQT
TSSSAFSTSIFNNTTNVGTAGGQFVPTSSPFPMFPQPAPVQPSSSFSFQPQGQPGGFSGV
SKPMNMAPFGQQTSSQSSMVMQPTLVSNPFGTLPAMPQMSIGNGGSSPSIQYGISSLPVA
EKPHPSRTLSMVVPRHLSQRRIKLLPRKYNATSDGKVPFFADDEESSVTPKADAFFIPRE
NPRSLIIRQTDQWPSRSAVDRQPIPRDSAHLDEDKDAFVGRERNKAAMSPARSGQAGNGH
DASTEPEAFVRHVNGASIEKMMPKLSQADYFTEPSLEELAAKERAEPGYCCQVRDFVVGR
QGYGSIKFLGETDVRGLDLESVVQFNNREVVVYKEDSEKPPVGEGLNKAALVTLLNIKCM
NRKTGEPCTEGPRLDKFKETLVKTAKEQGAEFVSFDGAKGEWKFRVKHFSSYGFGES
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
catcctcctgttgcagcgttcgggcagtcgtcgtccgccagcaaccctttcgggcagcag
acctcgagcaccaacccgttcgggacccagcagcagcctgcctttggccagaccaatgcc
gccaccagcaaccccttcgcgcctagaccgtttggcagcccaacccccgccttcggagga
gcgcagacagggaccagctcgccgttcgggggtacgtctgcctttggccagccatccgct
tcggcgtttggggctgcagccactggcgcctttggccagcagcccaccccggcgtttggg
gctacagccacaggcgcctttggccagcagcccacaccggcgtttgggtccacgtcaacc
ggcgcctttggacagcagcaaacaccggtgtttgggtccacgtcaaccggtgcctttggc
cagcagcaaaccccggcgtttggctcgacgtcaacgggcgcctttggccagcagcaaacc
ccggtgtttggctcgacgtcaaccggcgccttcggccagcagcaaaccccggcgtttggc
tcgacgtcaaccggcgcctttggccagcagcccaccccggtgtttggttcgacgtcgacc
ggtgcctttggccagcaaccaacaccggcgtttggctctacgtcaactggcgtctttggc
cagccaaccacgccagcgtttggctcgacggcaactggcgcctttggccagccatcaacg
cccgcgttcggcagtggcgccacaacctccaaccctgccagtggatctctgtttggacaa
aagtctagtttcggtggttttggttcatctcctaaccagtctactacatttggcaacaac
aattttggcaccacaactactccgaccttcggtgcctctacatcaacatccttatttggt
gctcccggcacctcaacgtttggttcgaccactactcctggatttggatcttctccgtct
tttggacaatcaggagctgcaactagtagcacgctgttcggaacaactccgtcttctcca
tttggcttgccgacagcaccaccaacgtttgggcaaactacatttgggaatcaatctgga
ggaaccagaatacagcctcatgtacaaacaccagatcctgacggtgctacgagtggttct
caggcttcaaaacttgattccatatcagctatgcctgcatacaaagagaagagtcatgaa
gaattgaggtgggaagattaccagcgtggggacaaaggtggaccaaacacaactccagtg
gtgaataacttctcgccatctccacagccaagttttccaatcagtcaaccggcgccagtg
aatccattttctagtatctcaaattctactggtgcttttggtactacgccgagcctgttt
ccgtcccccggaacgaccttgtttggacaatcaactggttctcccttccaagcaaacact
tcacaatctctgtttgcaaataccactccttcaatattcggctcgtcatcggcaatcacg
actcctttcagttttggcccatcctttaacaataactctcaatcagctgggctgtttccg
tctttgtcttcccctgcaattgggcaacagccatcgagccactcatttaaccagcagacg
acaagcagttcagctttctccaccagtattttcaacaacacgactaatgttggaacagcc
ggaggacagtttgtccccacatcttcaccttttccaatgtttccacaacctgcccctgtt
caaccttcaagttcgttctcattccaacctcagggccaaccaggtggattctctggagtt
tccaaaccgatgaatatggccccatttggacagcaaaccagtagtcagtccagtatggta
atgcagccgactcttgtttcaaatcccttcgggacacttccagcgatgcctcagatgtcc
attgggaatggtggatcctcaccttccatccaatatggaatatcaagtttaccggttgct
gagaagccccatccgagtagaacattatcaatggtggtgcctaggcatttgtcacagagg
aggataaaactgttgccacggaaatataatgcgacatctgatggcaaggttccgttcttt
gctgatgatgaagaatcttccgtaacgccaaaagcagatgcctttttcatccctagagaa
aacccaagaagtctgataatccgtcaaacagatcagtggccttcacgtagtgcagttgac
cgacaaccaattccaagagattcagctcatcttgacgaagacaaagatgcttttgttggg
agggagcgcaataaggctgccatgtcaccggctcggtctggtcaagcaggaaatggtcat
gatgcatcaactgagcctgaggcttttgttcggcatgtgaatggtgctagcattgagaag
atgatgcctaagctctcccaggcagattacttcacggagcctagcctagaggagcttgcg
gcgaaagaacgtgctgaaccaggctactgctgtcaggttagagactttgttgttggacgt
caaggctatggcagcatcaaattcttgggagaaacagatgtgaggggccttgatctggag
tcggttgtccaattcaataaccgtgaagtggtcgtgtacaaggaggacagcgagaagccc
ccagttggcgagggcctgaacaaagctgcattggtgactcttttgaacatcaagtgcatg
aataggaagacaggcgagccgtgcacggagggtcctaggctggacaagttcaaggagacg
ctggtgaagacggccaaggagcagggagctgagttcgtgtcatttgacggcgccaagggc
gagtggaagttcagggtgaagcacttcagctcctatggatttggcgaaagctga
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