Lolium rigidum (rigid ryegrass): 124696312
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Entry
124696312 CDS
T09103
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
124696312
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
124696312
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
124696312
NCBI-ProteinID:
XP_047085002
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Position
3:complement(246174781..246178053)
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AA seq
686 aa
AA seq
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MAAVQIVQLAAVTSSLVLLLLQPVAATMVPPAAAPGARDSAGVTLHVQRHQVLVDNGVVQ
VSVSKPQGQITGVRYAGERNLLHFGNGDENSGGYWNVFWNFPGSGQPRGRIDMLDSTDFR
VVSSSKEQVELSFRSTYDPSRFNSVRLTVDKRLVMLRGSSGFYCYAIFEHANSWPALNIT
EARLAFKLNTARFNYMAVSDRIQRYMPRAADRDPPRGKPLAYKEAVLLINPAEPQFRGEV
DDKYQYSLDNKDNKVHGWIGGGPVPMGFWVITPSNEFKSGGPLKRELTSHVGPTSLTMFL
GTHYVGNDIVAKIDDGEHWKKVMGPVFIYLNSNPSRGSFQALWEDAKAQAEAEARKWPYT
FLESPDFHKAAERGSVTGRLLVRDKYMSRVDMPARLAYVGLAAPGAPGSWATESKGYQFW
TRASATCGTFAIGNVLAGEYNLYAWVPGILGDYMYAASVTVSAGGAVSLGDLVFEPPRSG
PTLWEIGVPDRSAAEFFIPDPNPKYLSKLFLTRDNKYRQYGLWDRYADLYPRADPVFTIG
VSNYSNDWFFAHVTRKVGGGVGLTNAPTTRRIRFNLGRVVADGTYTLRVALAAAQMSRLQ
VQVNEATRNGVFNTLEFGDGNAIARHGDHGTWWSFEFPIKGYLLMEGENTISITQVRAFS
EFFGVMYDYIRLEGPPGSWRDPTTLL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttcagatagtccagctcgccgccgtcacgtcgtcgctggtgctgcttctg
ctgcaaccggtggcggcgacgatggtgccgccggcggcggcgccgggagcacgcgacagc
gccggcgttacactgcacgtacagcgacaccaggtgctggtggacaacggcgtggtgcag
gtttcggtgtcgaagccgcagggacagatcaccggcgtccgctacgccggcgagcgcaac
ctcctccacttcggcaacggcgacgagaactccggcgggtactggaacgtgttttggaac
tttccagggtccggtcagccaagaggcaggatcgacatgctggacagtacagacttcagg
gtggtttcttccagcaaagagcaagtggagctctccttcaggagcacctacgacccatca
cgcttcaacagcgtccggctcaccgtggacaagcggctggtgatgctgagaggcagctcc
gggttctactgctacgccatctttgagcacgcgaacagctggccggcgctgaacatcacg
gaggcacggctcgccttcaagctcaacacggcgaggttcaactacatggcggtgtcggac
aggatccagaggtacatgccgagggcggcggaccgggacccgccccggggcaagccgctg
gcgtacaaggaggccgtgctgctgatcaaccccgcggagccgcagttcaggggggaggtg
gacgacaagtaccagtactcgctcgacaacaaggataacaaggttcatggctggatcggc
ggcgggcccgtccccatggggttttgggtcatcacccccagcaacgagttcaagagcggt
gggccgcttaagcgcgagctcacctcgcacgtcggcccaacctccctcacgatgtttctt
ggaacacattacgtcgggaacgatatcgtggccaagatcgacgacggcgagcactggaag
aaggtgatgggcccggtgttcatctacctcaactccaatccgagcaggggaagcttccag
gcgctgtgggaggacgccaaggcgcaggcggaggccgaggcgagaaagtggccctacacc
ttcctggagtcgccggacttccacaaagccgccgagaggggctccgtcaccggcagatta
ctggtcagagacaagtacatgagccgcgtcgacatgcccgcccgacttgcctacgtcggc
ctcgccgcgcctggggcacccggctcctgggcgaccgagagcaaaggctaccagttctgg
acgagggcttcggcgacctgcggcaccttcgccatcggcaatgtcctcgcgggggaatac
aacctctacgcctgggtacccgggattctcggcgactatatgtacgccgcttcggtgaca
gtgtcggccggcggcgctgtcagcctcggcgacctcgtgttcgagccgccgcgatcgggc
ccgacgctctgggagatcggcgttcccgaccggagcgcggccgagttcttcatcccggac
cccaaccccaagtatctcagcaagctcttcctcacaagagacaacaagtaccggcagtat
ggactgtgggataggtacgccgacctgtaccccagagccgaccccgtcttcaccatcggc
gtgagcaactactccaatgactggttcttcgcgcacgtcacgaggaaggtgggcggcggc
gtcggcctgaccaacgcgccgacgacgcgccggatccggttcaacctgggccgcgtggtc
gccgacggcacctacacgctgcgtgtcgccctggcggccgcgcaaatgtccaggctgcag
gtgcaggtgaacgaggcgacgaggaatggagtattcaacacgctcgagttcggcgacggc
aacgccatcgcgcggcatggcgaccacggcacgtggtggagcttcgagtttcccatcaaa
gggtacctgctcatggaaggggagaatacgatcagcatcacgcaggtcagggccttcagc
gagttcttcggggtcatgtatgattacattcggctcgaagggcctcccggttcttggcga
gatcccaccacgctactttga
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