Lolium rigidum (rigid ryegrass): 124696345
Help
Entry
124696345 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase Os03g0188200-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124696345
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124696345
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
124696345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf_RING_Vps8
zf-RING_16
Prok-RING_1
TMEM192
Motif
Other DBs
NCBI-GeneID:
124696345
NCBI-ProteinID:
XP_047085033
LinkDB
All DBs
Position
3:complement(60281333..60282568)
Genome browser
AA seq
359 aa
AA seq
DB search
MDRGQTALLLLPLLLLSAAQPSLAQQSNGTSSHRSRTAGGFTPTTAIILVVLIAALCLLT
VFSLYINRCARAHPLPRRPSRRAAPDQFVGDNAAAGGIRSDQCRPNGLDREVVEAFPTAV
YGDVKARMATTKSGPLECAVCLAEFADADELRILPSCCHVFHPDCIDPWLAGAVTCPLCR
ADLTEPAAAGSADLTLTGRQEMAVQEEEPQEADEESSVVSFTAESLSSFSTVWRHEFAGA
EYNHYRRTQSAMDAPDRHTLRLPEHVMKELAAVRRHRRAASLAAEYPGTVDQRTPGWLTS
FLRSMSWQRQRRADSDAGEEQGSGGGNKRVYPVTGAPSGSGSGGDEKKDSSDVDALNRV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcggccagaccgccctgctcctccttccgcttctgctcttatcggccgcgcag
ccatctctggctcaacagagcaacggcacgagcagccaccgctccagaaccgccggcggg
ttcacgccgaccaccgccatcatactcgtcgtcctcatcgccgccttgtgcctcctcacc
gtcttctccctctacatcaaccgctgcgcccgggcgcaccctctcccgcgccggccgtcc
cgccgcgccgcccctgatcagttcgtcggcgacaacgcggccgccggcggcatccgctcc
gaccagtgccgcccgaacggcctcgacagggaggtcgtggaggccttccccacggccgtc
tacggcgacgtgaaggcccgcatggcgacgaccaagtcgggcccgctggagtgcgccgtc
tgcctcgccgagttcgcggacgccgacgagctccgcatcctcccgtcatgctgccacgtc
ttccacccggactgcatcgacccgtggctcgccggcgccgtcacctgcccgctctgccgc
gccgatctcaccgagcccgccgccgccgggagcgccgacctgacgctgacggggcggcag
gagatggccgtgcaggaggaggagccacaggaggccgacgaggagtcctccgtggtttct
ttcaccgctgaatctctcagcagcttcagcacagtatggagacacgagttcgccggcgcc
gagtacaaccactaccggaggacgcagtcggccatggacgcgcccgaccggcacactctc
aggctgccggaacacgtcatgaaggagctcgccgccgtccggaggcaccggcgcgcagct
agcctcgccgcggagtacccgggcaccgtggatcagaggacaccggggtggctcacgtcc
ttcttgcggtccatgtcatggcagcggcagcgccgggcggactccgatgccggcgaggaa
caaggcagcggcggcggcaacaaacgggtttatccggtgaccggagcgccgagcggatcg
ggatccggtggggacgagaagaaagacagctccgacgttgacgcgttaaaccgggtttga
DBGET
integrated database retrieval system
