Lolium rigidum (rigid ryegrass): 124696598
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Entry
124696598 CDS
T09103
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00531
Glycosaminoglycan degradation
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
124696598
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lrd00536
]
124696598
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
124696598
Glycosaminoglycan binding proteins [BR:
lrd00536
]
Heparan sulfate / Heparin
Enzymes
124696598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
124696598
NCBI-ProteinID:
XP_047085260
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All DBs
Position
3:67906918..67910520
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AA seq
537 aa
AA seq
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MAARLLLLLLALACLYAPRWASAQETTVIVKGSAKIAETDPSYVCATMDWWPPEKCNYNQ
CPWGQSSILNLDLDHPFLAQAIKAFDNLRIRLGGSLQDRVVYDVGTNSPCSPFTNVSNGL
FGFSAGCLSMDRWDKLNDLFQQTGAIITFGLNALDGRHNVQRSFWAGKWNSTNAYDFVNY
TVSKGYPVDSWEFGNELSGHGTGARVDAELYGKDVIELRSILRQLYRAPLSQPLLLAPGG
FFDQQWYTRLLQTSGHGVVSALTHHIYNLGGGDDVHLMRKIVDPKYLDRAEDTYRDMQLT
LQRHGTWASAWVSESGGVFNNGRHLVSNTFMNSIWYLDQLGMASKYNTKVFCRQTLIGGN
YGLLDTETFLPNPDYYSALLWHRLMGNGVLSVDINAPRKLRAYAHCSKRHQGITVLLINL
SNSTGYNVTLQNDLNVSVDRTSGHRRRHSSFTKRAVSWLGGKASSETTKRDEYHLTAKDG
DHQSRTMLLNGVSLELGDDGSVPALNPVPAAVDSPVYLAPTSIAFVVLPRFEAKACS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaggcttctccttctacttctggcgctcgcctgtctctatgctcctcgctgg
gcttcggcgcaggaaaccacggtcatagtcaaaggatcggcgaaaattgccgagacggat
ccgagctacgtgtgcgctaccatggactggtggccgcccgagaagtgtaactacaaccag
tgtccatggggccaatcttcgattctgaatttggacttggatcacccctttctggctcaa
gccatcaaagcttttgataatttgaggattaggctgggaggctctttgcaagaccgagtt
gtttatgacgtggggacaaatagtccatgctctccgttcacaaatgtatcaaatggtttg
tttggtttctcagccggttgtctaagtatggataggtgggacaaactgaatgatttattc
cagcaaacaggagcaattatcacgtttggtctgaatgcgctcgatggaaggcataatgtc
caacgttccttctgggcaggaaaatggaactctacaaatgcgtacgattttgtgaactac
acggtctcaaaaggatacccagttgactcgtgggaattcggtaatgagctgagtgggcat
ggaaccggcgcaagagtcgatgctgaactttatgggaaggatgtaattgaacttcgatcc
atactccggcagttgtatagggcaccactctcccagccactcctactagcccctggagga
ttctttgatcaacagtggtacactcggttacttcagacttcaggtcacggtgtcgttagt
gccttgacgcatcatatttacaatcttggaggaggggatgatgtgcaccttatgaggaag
atagtagaccctaagtacctagatcgtgctgaagatacttacagggacatgcaacttacc
ctccaaaggcatggaacatgggcttctgcttgggttagtgaaagtggtggggtgttcaac
aatggccgtcacctggtgtcgaatactttcatgaatagcatctggtatctcgatcaactt
ggaatggcatcaaagtacaatacaaaagtgttctgcagacagactctcatcggtggcaac
tatggtctgcttgacacagaaactttcttaccaaatcctgattactacagtgctctacta
tggcatcggcttatgggcaatggagttctttcagttgatataaatgcaccccgtaagctg
cgtgcttatgctcactgcagtaaacgacatcaagggatcactgtcctcctgatcaaccta
agcaacagcactggatacaacgtgacccttcagaacgacctcaacgtgagcgtcgacaga
acaagcggacaccggcggaggcacagctctttcaccaaaagagcagtctcatggctggga
ggcaaggcgtcaagcgagaccacgaagagggacgagtaccatctgaccgccaaggacggc
gaccaccagagcagaacaatgctgctcaacggcgtctcgctggagctgggagacgacggc
agcgtcccagctctgaacccggtgcctgccgctgttgattcgccggtgtacctggccccg
acgtcgatcgcgtttgtagttcttccgaggtttgaggccaaggcctgttcttga
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