Lolium rigidum (rigid ryegrass): 124696749
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Entry
124696749 CDS
T09103
Name
(RefSeq) PHD finger protein At1g33420-like
KO
K26271
PHD finger protein MS1/MMD1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124696749
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
124696749
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GFIT
Motif
Pfam:
PHD
PHD_5
PHD_2
Motif
Other DBs
NCBI-GeneID:
124696749
NCBI-ProteinID:
XP_047085384
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Position
3:complement(300505867..300582374)
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AA seq
787 aa
AA seq
DB search
MTFPSSEEIKPRLRAFFSSRFVIIEAGQSPAVGATTETSGVPLFDASDITLAAVLLEVAL
AVTVEPFFFTISGCALPPPPRRRRAMAVHGRPTKRARRTRVTAEPCLLDMRAFPGATERA
GAATFRANVRGFLASHASPAPPPAPAEWGQDQEAVLGDAGAVWQVGFRVGGDGEAAVVVM
DVVEEDVPRARRVHCDHCTVAGWSRHPVCGKKYHFIIRNDNMPRCKTCRRCGLMVELFQT
RCPSCSHGSGFAPDESEDWDYVQIDNPSHLLHGIVHENGFGHLVRINGHQGGSSLLTGYQ
LMDFWDRVCRYLRVRKVSVMDVSKKFEVDYRVLHAVATGCSWYGQWGFKLGSGSFGITSE
TYCKAIENLSSVPLSHFFPHSRSPRNQLQDTIAFYQSLSKCPLTTFRDLFLYVLGLVANK
SVHNHLVTMHKKEIVYDVDLREGNWTDEEIKRAVDVALKVLRAADSWVAMRSLKAATAHP
IGSPELVDYCLKTISGTRTFDGMVVVVRCNSETNTIEYRLTNETMLPPKNASLPTQEHLL
RDIKFLYDALLCPHTMHPYKPEQIHDQAKRSAMVLLDCKQFLNHYDLEEDFLPQNQSALH
IWCQVELLDQVDDPPSLPAELLTLPQTATVADLKMEAMRTFRDVYLMLQSFVPNQLLDCP
TAGDTTQVKLLFGAKGTVHIQGKCVGGERRVAIYRMERGVDKWTVNCSCGAMDDDGERML
SCDLCQVWQHTRCAGISDFDQVPKRYVCSSCKLLHKPKMYSSFSNKRCKTAGSFSHASGG
LWRSHIG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcccctcgtcagaagaaatcaaaccaaggctacgagccttcttctcgtcgcgc
ttcgtcatcattgaggcaggccagtcaccggctgttggtgccacaacggaaacctccggc
gtgcccctcttcgatgcatcagatataaccttggcagcggtactgctcgaagtagcgctg
gcggtgacagtggagcccttcttcttcaccatctcaggatgtgctctgccccctcctccc
cgccggcgtcgagcgatggcggtgcacgggcggccgacgaagcgggcgcggcggacgcgg
gtgacggcggagccctgcctgctcgacatgcgggccttccccggcgccacggagcgggcg
ggcgccgccacgttccgcgccaacgtgcgcgggttcctggccagccacgcgtccccggcg
ccgccgcccgcgcccgccgagtgggggcaggaccaggaggccgtgctgggcgacgccggc
gccgtgtggcaggtgggtttccgtgtgggcggggacggcgaggcggcggtcgtggtcatg
gatgtcgtcgaggaggacgtgcccagggccaggcgcgtccactgtgaccactgtactgtc
gccggctggagcaggcaccctgtatgtggaaagaagtaccacttcataattcggaatgac
aacatgcccagatgcaaaacctgccgccgttgtggtctcatggttgaattgttccaaaca
aggtgtccctcatgcagtcatggttctgggttcgcccctgatgaatcagaagattgggac
tatgtgcagattgacaatccgagccatttgctacacggcatagttcatgaaaatgggttt
ggacaccttgtacggattaatggtcatcaaggtggctccagcttattgacagggtaccaa
ctgatggacttttgggatcgtgtttgcagatacctccgagtaaggaaggtctcagtgatg
gatgtctcaaaaaagtttgaagttgactaccgggttttacatgctgttgccactggctgt
tcttggtatgggcagtggggattcaaacttggcagtgggagctttggaatcacgtctgaa
acctactgcaaagccattgaaaacctctcgtcggtgccactgtcccacttcttccctcat
tctcggtctcctcgaaaccaattgcaggataccattgctttctatcaatccctctcaaag
tgccccctcaccacattccgtgatttgttcctctatgttttggggcttgttgctaacaaa
agtgtgcacaaccaccttgtaacaatgcacaaaaaggagatagtatatgatgttgatttg
agagagggaaactggactgatgaggaaataaaacgagcagtagatgttgctctgaaagtt
ctccgtgctgcagatagttgggtggctatgcgaagcctaaaggcagcaacagcccatcca
attggttcaccagagctggttgattactgcctcaagaccattagtggtacaagaaccttt
gatgggatggttgtagtagttcgttgcaacagcgagacaaacacaatagagtacaggctc
acaaatgaaaccatgttgccaccaaagaatgcgagcttgccaacccaggaacaccttctg
cgtgacatcaagtttctctatgatgctctcctctgccctcatacaatgcacccttacaag
ccagaacaaattcatgatcaggccaagagatctgccatggtccttttggactgcaagcaa
ttcttgaatcattatgacttggaagaggattttttgcctcaaaaccaatctgcgttgcac
atctggtgccaagtggagctattggatcaggttgatgatccacccagcctcccagcagag
cttctaacacttcctcaaacagctactgttgctgatctgaagatggaggctatgaggaca
tttcgagatgtgtacttgatgttacagagctttgtcccaaaccagcttcttgattgtcca
actgcaggggacacaactcaagtcaagctcttatttggagcaaaagggactgttcacatc
caaggcaagtgtgtaggaggtgagcgtagagttgcaatatatcggatggagaggggtgtt
gacaaatggacagttaattgttcatgtggagccatggatgatgacggcgagagaatgcta
tcttgtgacttgtgccaggtgtggcagcacactaggtgcgctgggattagtgattttgat
caggtcccaaagagatatgtgtgttcatcatgtaaattactccacaagcccaaaatgtat
agtagtttctctaacaagagatgtaagactgctggctcttttagtcatgccagtggtggc
ttgtggaggtctcacatcggttaa
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