Lolium rigidum (rigid ryegrass): 124697155
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Entry
124697155 CDS
T09103
Name
(RefSeq) pre-mRNA-splicing factor 18-like
KO
K12817
pre-mRNA-splicing factor 18
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124697155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124697155
Spliceosome [BR:
lrd03041
]
Complex C
Other components
Step II factors
124697155
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
LcrG
Motif
Other DBs
NCBI-GeneID:
124697155
NCBI-ProteinID:
XP_047085743
LinkDB
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Position
3:343572760..343574050
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AA seq
386 aa
AA seq
DB search
MDVLKRELQRKRQLIDADFGGRKVLRRAEIEAREIQRLRAAERERLLEKQRKREQQQQQQ
LRSSRPAASASPSASSSSLPPPAVVGEAAKAERADAPKESSLPREEVVRRLRLLRQPATL
FGEDDAARLRRLHDVLEDPAAVAGIDAAEIGEGQTNDFLRDIQALRAKAVAAKPKAVGAA
ERSDGGKEEKQEVPFEDLCEEDKIVAFFKRLLSEWSREVDEMPEAERRTAKGKAVVATCK
QCARYLDPLFKLCERKALPDDVQRALLDVVKCCMRRDYLAATDNYIKLAIGNSPWPIGVT
MVGIHERSAREKIHTNSVAHVMNDETTRKYLQSVKRLMTFCQRKYPTDPSRSVEFNSLAN
GSDLQALMAEKSANGSDETLRLVAAS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgctgaagcgcgagctccagcgcaagcgccagctgatcgacgccgacttcggg
ggccgcaaggtcctccgccgcgccgagatcgaggcgcgcgagatccagcgcctccgcgcc
gccgagcgggaacgcctgctcgagaagcagcgaaagcgggagcagcagcagcagcagcag
ctccggtcctcccgccccgccgcctcggcatcgccctccgcgtcctcctcctcattacct
ccacccgccgtcgtcggcgaggcggcgaaggccgagcgcgcggacgctccgaaagagtcg
tcgctcccgagggaggaggtcgtgcggcggttgcggctgctgcgccagccggccacgctc
ttcggcgaggacgacgccgcgcgcctccgccgcctccacgacgtgctcgaggaccccgcc
gcggtcgcgggcatcgacgccgcggagatcggggaggggcagaccaacgacttcctccgg
gacatccaggccctgcgtgccaaggcggtggcggcgaagcccaaggcggtcggcgcggcc
gagaggagcgacggcgggaaagaggagaagcaagaggttccgttcgaggatctttgcgag
gaggacaagatcgtagccttcttcaagaggctgctgagcgagtggagccgggaggtggac
gagatgcccgaggccgagcgccggaccgccaagggcaaggccgtggtggccacctgcaag
cagtgcgcgcgctacctcgatcccctcttcaagctctgcgagaggaaggctctccccgac
gacgtccagcgcgcgctgctcgacgtggtgaagtgctgcatgcggcgggactacctggcg
gcgacggacaactacatcaagctggcgatcggcaactcgccgtggccgatcggagtgacc
atggtgggcatccacgagcggtccgcccgcgagaagatccacaccaacagcgtcgcgcac
gtgatgaacgacgagacgacgaggaagtacctgcagtcggtgaagcggctcatgaccttc
tgccagcggaagtaccccacggacccgtccaggtccgtcgagttcaacagcctcgccaac
ggcagcgacctgcaggctctcatggccgagaagagcgccaacggctcggatgagacgctt
cggctggtggccgcatcgtga
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