Lolium rigidum (rigid ryegrass): 124697531
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Entry
124697531 CDS
T09103
Name
(RefSeq) eukaryotic initiation factor 4A isoform X1
KO
K03257
translation initiation factor 4A
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124697531
03012 Translation factors [BR:
lrd03012
]
124697531
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124697531
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124697531
mRNA cycle factors
Stress granule specific factors
124697531
Translation factors [BR:
lrd03012
]
Eukaryotic type
Initiation factors
eIF-4
124697531
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124697531
Exosomal proteins of bladder cancer cells
124697531
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DUF2780
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
124697531
NCBI-ProteinID:
XP_047086070
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All DBs
Position
1:complement(308092938..308121124)
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AA seq
414 aa
AA seq
DB search
MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLR
PDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV
RILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKM
RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ
PENYLHRIGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaatggcaccagaaggttcccagttcgatgcaaagaactatgactccaaaatg
caggagctgctgagccaaggtgagactgaggagttcttcacctcctacgatgaagttcat
gagagctttgatgacatgggtctccaagagaaccttctcaggggaatttatgcttatggt
tttgagaagccttcggccatccagcagaggggcattgttcctttctgcaagggtcttgat
gttatccagcaagcacaatctggaacaggaaagactgctaccttctgctctggtatcttg
caacagcttgactatggtttggttgagtgccaggccttggtccttgctcccacccgtgag
cttgcacagcaaattgagaaggtcatgcgtgcacttggtgactacttgggcgtgaaagtt
catgcgtgtgttggaggaacctctgtccgtgaggaccagagaattcttgcaagtggagtg
catgttgttgttggcacacctggtcgtgtgtttgacatgcttcgtaggcagtctcttcgc
cctgacaacatcaagatgtttgttctggatgaagctgatgagatgctttctcgtggtttc
aaggatcagatttatgacatcttccagctgctcccaggaaagattcaagttggtgtcttc
tctgctaccatgccccctgaagcccttgagatcacccgcaagttcatgaacaaacctgtt
aggatccttgtcaagagggatgagcttacccttgagggtatcaagcagttctatgtcaat
gtggagaaggaagagtggaagcttgacacactctgtgacctgtatgagactcttgccatc
acccaaagtgtcatctttgtgaacacccgccgcaaggtggactggctcactgacaagatg
aggggcagggatcacacagtttctgctactcacggagacatggaccagaacactagggac
atcatcatgagggagttcagatctggttcttcacgtgtgctcatcaccactgacctgctt
gctcgtggtattgatgtccagcaagtatccctggtcatcaactatgatcttccgacccag
ccagagaactacctccatcgtattggtcgtagtggtcggtttggaaggaagggtgttgca
atcaacttcgtgacccgtgaagatgagcgtatgctgtttgacatccagaagttctacaac
gttgtgattgaagagctcccagccaacgttgccgacctcctgtag
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