Lolium rigidum (rigid ryegrass): 124697550
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Entry
124697550 CDS
T09103
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Module
lrd_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124697550
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
124697550
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
NosD
Motif
Other DBs
NCBI-GeneID:
124697550
NCBI-ProteinID:
XP_047086081
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Position
3:complement(383926264..383927544)
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AA seq
426 aa
AA seq
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MASAKLVPFPLLVLLFLSICNAASSASLVEETNSSLKSSTGAPGANSVVFNINNYGARGD
GKHDDTQALDKAWKAACSSWRPAVLLVPKGKSYLVKFIALSGPCKSSIVFMVKGTLVAPR
SRSAWREKNRRHWIVIQRIAGLTVTGGGTINGKGKIWWKNSCKTNKALPCKGAPTALTFH
LCNNLTVENLKILNSQQIHLSVEDCSNVQLARLSITAPGTSPNTDGIHITHSRDVQVRDC
LIKTGDDCMSIESGTHNLHVTRVVCGPGHGISIGSLGDDNSRAEVSRIYIDTVRLYGTTN
GARIKTWQGGSGYAKDIVFQNMIMDNVQNPIIIDQNYCDSAKPCKSQESAVEVSNVVFKN
IRGTTISKDAIKLSCSKNFPCSGIALQDIDLKLQGGKGDTESTCQNAKWRKSGNVVPLPC
KSNESE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccaagctcgtgccgtttcctttgctcgtgctgctctttctgtccatctgc
aatgccgccagctctgccagcttagtcgaagagactaacagctcgctgaagagctccacc
ggtgcacctggggccaactccgttgtgttcaacatcaacaactacggtgcccgtggcgac
gggaagcacgacgacacccaggcgctagacaaggcatggaaagcggcgtgctcctcttgg
cggccggcagtgctgctagttcccaagggcaagagctacctggtcaagttcatcgctctc
tccggaccatgcaaatccagcatcgtcttcatggtgaagggcacgctggtcgctcctcgg
agcaggtcggcatggagggagaaaaacaggaggcactggattgttatccagcgcatcgcc
ggtctcactgttaccggcggtggtacgatcaacggcaaaggcaagatttggtggaagaac
tcttgcaagaccaacaaggctctgccttgcaagggcgctccgacggctttgacatttcat
ctctgcaacaatctcacggtggagaacctgaaaattctaaacagccagcagatccatctg
tcggttgaggattgcagcaacgtgcaattggcgcgtttgtcaatcacggcacccggtacc
agtccgaacaccgatggcatccacatcactcacagcagagatgtgcaagtcagagactgt
cttatcaagaccggcgacgactgcatgtccatcgagagtggaacccataatcttcatgtc
accagagttgtttgcggtccaggacatggcatcagcattggaagcttaggtgatgataat
tccagagccgaagtttcccgtatttacattgacaccgtacggttgtatggtacaaccaac
ggagcccggatcaagacgtggcagggaggtagtggatatgcaaaggatatcgtattccag
aacatgatcatggataatgtgcaaaacccaataataattgaccagaactactgcgactcg
gccaagccgtgcaagagtcaagaatcggcagttgaggtgagcaacgtggtgttcaaaaac
attagagggactaccatttccaaggatgccattaagttgagctgcagcaagaatttccca
tgctctggcattgccttacaggacatcgacctcaaactgcaaggtggcaagggtgacact
gaaagcacatgtcaaaatgcaaaatggagaaaatcaggaaacgttgttccactaccctgt
aaaagtaacgaatccgagtag
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