Lolium rigidum (rigid ryegrass): 124697696
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Entry
124697696 CDS
T09103
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1A-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00270
Cysteine and methionine metabolism
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
124697696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124697696
03032 DNA replication proteins [BR:
lrd03032
]
124697696
03036 Chromosome and associated proteins [BR:
lrd03036
]
124697696
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lrd02048
]
124697696
Enzymes [BR:
lrd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
124697696
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
124697696
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
124697696
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124697696
Prokaryotic defense system [BR:
lrd02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
124697696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
LNP1
Motif
Other DBs
NCBI-GeneID:
124697696
NCBI-ProteinID:
XP_047086199
LinkDB
All DBs
Position
3:394837804..394843040
Genome browser
AA seq
1258 aa
AA seq
DB search
MSETELDSLTEEHHSTGENGQAIVRKRPKRAAACSNFREKEFDLSEEDSPVKVKETRTEE
ETEAVRLTLVQEAEEWKVTNKERSKRGTSQKNVYIKISEAEIADDYPLPAYYKPYTPETD
EHIIFDHEVGTSVHDLPVKILNNWALYNSDSRLVSLELVPMKPGAENDIVIFGSGSMTED
DRSFHSTAEAEQLSSSSSSKSGQKDDGIPIYLSPIKEWLVEFGGSVICITIRTGVAWYKL
HQPTEQYAPWCDTVLKTARLAISIMKLLEDQTRASKLSFDNVIKKVAQFDRGDAAFISAD
ATLVERYVVVHGQIILQIFARYPRKSIQGSAFIKGLARMMNEKRHTKLSVKEKPKAMRGG
NLNPSAKMGPVEKRKLMRATTTRLINKIWGGYYATHFPEDAKEGDVNGEPNETEEQEETE
DDEAEGEDEVEEKRISRTSPSECSKKPSSSTRREIECEGQTAGKTESGEALYKFVRVRDL
EIGVGGAVTVEDDSGEAIMCFVEYIYQKLDGTQRIHGRVLEKGSQTVLGDAANEMEVFLT
NDCFEFEVGDIKESVTVNLQNIPWGHEYREQQERDNAEERKKKGLPTEYFCKSLYCPEKG
AFFSLHYNKLGTGTGTCSSCEEREAVREEFKILSDTTFVLRNVAYTIQDFIYIRPEFFSP
VEGQGANKAGRNVGLKPYVVCQLLSINAPAAKKADPESARISVRRLYRPEDISSDKAYCS
DIREVYYSEYKMSVPVVRIEGKCQVTTKDDLPNSNFPAAVDHVFYCERLYDPDSGALKQL
PTMTLTRKASTSKKDKGKHIICDDDSLADKKDTVISANSLATLDIFAGCGGLSEGMKRAG
ASHTKWAIEYEEPAGQAFKENHPEAAVFVENCNVILKAIMDKCGDGNDCISTAEASAQAD
NLSAEEIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPR
FFLLENVRNFVSFNKGQTFRLAIASLLGMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPG
ETLPDWPEPMHVFASPELKINLPDGKYYAAAKSTARGAPFRSITVRDTIGDLPPVQNGAS
KLAIQYGSKPVSWFQKKIRGDTPSLSDHIAKEMNELNLIRCKRIPKRPGCDWHDLPDEKV
KLSKGQLVDLIPWCLPNTAKRNNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQD
RIITVRECARSQGFPDGYRFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAIDSKLSAA
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagactgaacttgacagtttaactgaagagcaccacagtaccggtgaaaatggt
caggccattgtccggaagagaccaaagagagcagctgcctgctctaatttcagagagaag
gaattcgacttatctgaagaagattcgcctgtcaaagtcaaggaaacccggactgaagag
gaaacagaggctgttaggttgacactggtgcaggaagcggaagagtggaaggtgacaaac
aaggagagaagcaagcgtggaacttcgcagaagaatgtctacatcaagataagtgaagct
gagattgctgatgactacccactgccagcatactataaaccttatacaccagaaacggat
gagcacataatatttgaccatgaagttggtacgtctgtgcatgatctgccagtaaaaata
ctcaacaactgggctctgtataattcagattccaggctcgtttcgctggagctcgtccct
atgaagccaggcgcagaaaatgatatagtgatctttggatctggttccatgacagaggat
gatcgtagtttccattcaacagctgaggcagaacagttatcttcttcgtcctcaagtaaa
tctggccagaaagatgacggaattccaatttatctgagtccaatcaaggaatggcttgta
gagtttggcggttcagtgatctgcataactattcgaactggcgtagcttggtacaaacta
caccagccaacagagcagtacgcaccatggtgtgacactgtccttaaaacagcaagactg
gctatcagcatcatgaaacttttagaagaccaaactcgtgcttcaaaactttcttttgat
aatgttatcaagaaagtagcacaatttgatcgtggggacgctgcatttatttcagcagat
gcaacacttgtcgaaagatatgttgtggtgcatggacagataattcttcagatttttgca
cgttatccacgtaagtctatccaagggagtgcctttatcaaaggccttgccagaatgatg
aatgaaaaaagacacacaaagctatcagtgaaggaaaaacctaaagcaatgagaggcggt
aatctgaacccaagcgcaaaaatgggccctgtagagaaaaggaaactgatgcgcgcgaca
actacaaggctgatcaacaagatatggggtggttactatgccacccatttcccagaggac
gcaaaggagggagatgtgaatggtgagccaaacgaaactgaggaacaagaagaaacagaa
gatgatgaagctgaaggggaggatgaagttgaagagaaacgtatctcgaggacctcgcca
tcagaatgttctaaaaagccctcatcaagtactcgtagagaaattgaatgtgaaggtcaa
acagccggaaaaacagagtctggagaagctttatataaatttgttagagtccgagatcta
gagattggtgttggtggagcagtcactgtagaagacgactcaggcgaagccatcatgtgt
tttgtcgaatatatctaccagaaacttgatggcacgcagaggattcatggaagagttctg
gagaagggttcacagaccgtccttggcgatgctgcaaatgaaatggaggtattccttact
aatgactgttttgaatttgaggtaggtgacatcaaagagtcggtgactgtcaatctccag
aacatcccttggggccacgagtacagagaacagcaagagagggacaatgcagaggagagg
aaaaagaaaggcttgccaacggagtatttttgcaagagtttatattgtcctgagaaaggc
gcatttttctccctccattataataaactgggcactggaactggcacttgcagttcttgt
gaagagcgagaagcagtccgtgaggaattcaaaatactatcagacactacctttgtcctc
aggaacgtggcatacactattcaagactttatttatatcagacctgagttcttctccccg
gtggaaggtcaaggcgccaacaaggctggaagaaatgtggggctcaagccttacgtggta
tgccaactgctgagtatcaatgctcctgctgctaagaaagctgatccagaatcagcgcgc
atcagtgtaagaaggctatacaggcctgaagacatttcttcagataaagcttactgttca
gatatcagagaggtatactacagtgaatataaaatgagcgtgcctgtggtaaggattgaa
ggaaaatgtcaggtcaccactaaggacgaccttccaaattcgaattttccagcagcggtt
gatcacgtcttctactgcgaacgtctatatgatcctgattctggagctctcaaacagcta
ccaaccatgactctaacaaggaaggcgtctacttcaaaaaaggataaaggaaagcatatt
atttgtgatgatgactctctagcagacaagaaggatacagtaatatcagctaactctcta
gcaactcttgatatttttgctggctgtggaggattatctgaagggatgaagcgagcaggt
gcatcacatacaaaatgggcaattgaatatgaagaacctgctgggcaagcatttaaggaa
aatcacccagaagctgcagtattcgtcgagaactgcaatgtcattctgaaagcaataatg
gataaatgcggtgatggtaatgactgcatttcgactgctgaggcctctgcgcaagcagat
aacctttcagcggaggagattaagaatctccccgtgccaggtgaagtagaatttatcaat
ggtggccctccatgccaggggttttctgggatgaacagattcaatcaaagtacatggagc
aaagtccagtgtgagatgattttagcatttctgtcctttgcggactatttccgcccaaga
tttttcctgctggagaatgttaggaactttgtttcattcaacaaaggccagaccttcaga
ctggcaatagcatcactcctggggatgggataccaggttcgattcggaattttggaggct
ggtgcttttggtgtcgcgcagtctagaaaaagggcattcatctgggctgctgcacctggg
gagactcttcctgactggccagagccaatgcacgtcttcgctagccctgagctgaaaatc
aatctaccagacggaaagtactatgcagctgccaagagcacagctagaggagctcctttc
cgctcaataacagtaagagatacaattggagacctgccaccggtgcagaatggtgccagc
aaactagcaatccagtatggaagcaaacccgtctcctggttccagaagaagattcgaggt
gatacgccttcactgagtgaccacatagccaaagagatgaacgaactgaatctcatcagg
tgcaagcgcatcccaaagcgcccagggtgtgactggcatgatctcccagatgagaaggtg
aagctatccaaagggcagctggtggacttgatcccttggtgcttgcccaacacagccaag
aggaacaatcagtggaaaggcctatatgggaggctggactgggagggcaacttccccaca
tctgtgacagatccccagccaatgggcaaggtcggcatgtgcttccaccctgatcaggac
aggatcatcactgttcgtgaatgtgcccgatctcagggcttccctgatggctaccgcttc
gccggcaacatccagaacaagcacaggcagatcgggaatgctgtaccacctccccttgcc
tacgctctagggaggaagctcaaggaagccatcgacagcaagctttcagcggcttaa
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integrated database retrieval system
