KEGG   Lolium rigidum (rigid ryegrass): 124697789
Entry
124697789         CDS       T09103                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd00040  Pentose and glucuronate interconversions
lrd01100  Metabolic pathways
Module
lrd_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    124697789
Enzymes [BR:lrd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     124697789
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix End_N_terminal
Other DBs
NCBI-GeneID: 124697789
NCBI-ProteinID: XP_047086286
LinkDB
Position
3:402909660..402910934
AA seq 424 aa
MASAKLVSSRLLVLLLLSICNAASLVEETNNSLKRSTGAPPGASSVVFNIHNYGARGDGK
HDDTQALAKAWKAACSSWRPAVLLVPKGKSYLVKFIALSGPCKSSIVFMVKGTLVAPRSR
SAWREKNRRHWIVIQHIAGLNVTGGGTINGKGKIWWKNSCKTNKALPCKGAPTALTFHLC
NNLKVENLKILNSQQIHLSVEDCSNVQLARLSITAPGTSPNTDGIHITHSRDVQVRDCLI
KTGDDCMSIESGTHNLHVTRVVCGPGHGISIGSLGDDNSRAEVSRIYIDTVRLYGTTNGA
RIKTWQGGSGYAKDIVFQNMIMDNVQNPIIIDQNYCDSVKPCKNQESAVEVSNVVFKNIR
GTTISKDAIKLSCSKNLPCSGIALEDIDLKLQGGKGDTESTCQNAKWRKSGNVVPLPCKS
NESE
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcttcggccaagctcgtgtcttctcgcttgctcgtgctactcttgctgtccatctgc
aatgccgccagcttagtcgaagagactaacaactcgctgaagagatccaccggtgcgccg
cctggggccagctccgttgtgttcaacatccacaactacggcgcccgtggcgacggaaag
cacgacgacacccaggcgctagccaaggcatggaaggcggcgtgctcctcttggcggccg
gcagtgctgcttgttcccaagggcaagagctacctggtcaagttcatcgctctctccgga
ccatgcaaatccagcatcgtcttcatggtgaagggcacgctggtcgctcctcggagcagg
tcggcatggagggagaaaaacaggaggcactggattgtcatccagcacatcgccggtctc
aacgttacaggcggtggcacgatcaacggaaaaggcaaaatttggtggaagaactcttgc
aagaccaataaggctctgccttgcaagggcgctcccacggctttgacatttcatctctgc
aacaatctcaaggtagagaacctgaaaattctaaacagccagcagatccatctgtcggtt
gaggattgcagcaacgtgcaattggcgcgtttgtcaatcacggcacccggtaccagtccg
aacaccgatggcatccacatcactcacagcagagatgtgcaagtcagagactgtcttatc
aagaccggcgacgactgcatgtccatcgagagtggaacccataatctacatgtcaccaga
gttgtttgcggtccaggacatggcatcagcattggaagcttaggtgatgataattccaga
gccgaagtttcccgtatttacattgacactgtacggttgtatggtacgaccaacggagca
cggatcaagacatggcaaggaggtagcgggtatgcaaaggatatcgtattccagaacatg
atcatggataatgtgcaaaacccaataataattgaccagaactactgcgactcggtcaag
ccgtgcaagaatcaagaatcggcagttgaggtgagcaacgtggtgttcaaaaacattaga
gggactaccatttccaaggatgccatcaagttgagctgcagcaagaacctcccgtgttct
ggcattgccttagaggacatcgacctcaaattgcaaggtggcaagggtgacactgaaagc
acatgtcaaaatgcaaaatggagaaaatcaggaaacgttgttccactaccctgtaaaagt
aacgaatccgagtag

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