Lolium rigidum (rigid ryegrass): 124697912
Help
Entry
124697912 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124697912
04121 Ubiquitin system [BR:
lrd04121
]
124697912
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124697912
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124697912
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124697912
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
FAR1_N
Prok-RING_1
HypA
DUF7129
Motif
Other DBs
NCBI-GeneID:
124697912
NCBI-ProteinID:
XP_047086392
LinkDB
All DBs
Position
3:102986341..102987769
Genome browser
AA seq
287 aa
AA seq
DB search
MASSPVSYWCYHCSRFVRVSPATVVCPDCDGGFLEQFPHPHPHPPPPPQRGGGGSGRRGA
MNPVIVLRGGSLSGFELYYEDGSGDGLRPLPGDVSHLLMGSGFHRLLDQFSRLEAAAPRP
PASKAAVESMPSVTVPGGGGAHCAVCQEAFEPGAAAREMPCKHVYHHDCILPWLSLRNSC
PICRSELPAAAVPEAEADAGLTIWRLPRGGFAVGRFAGGPREQLPVVYTELDGGFSNGVG
PRRVTWPEGEGQVDGGEGRIRRVFRNLFGCFGRGSSRPESSSQSRSG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctccggtgtcctactggtgctaccactgcagccgcttcgtgcgggtctcc
cctgccaccgtcgtctgcccggactgcgacggcggcttcctcgagcagttcccgcacccg
cacccgcacccgccgccgccgccgcagcgcggcggcggcggcagcggccggcgcggcgcg
atgaacccggtcatcgtgctgcgcggcggctcgctctccggcttcgagctctactacgag
gacgggtccggcgacgggctgcggccgctgccgggggacgtctcgcacctgctcatgggg
tccggcttccaccgcctgctcgaccagttctccaggctggaggcggcggccccgcgcccg
ccggcctccaaggcggccgtcgagtccatgccgtccgtcaccgtccccggcggcggcggc
gcccactgcgcggtctgccaggaggcgttcgagcccggcgccgccgcccgcgagatgccc
tgcaagcacgtctaccaccacgactgcatcctcccctggctctccctccgcaactcctgc
cccatctgccgcagcgagctccccgcggccgccgtccccgaggcggaggcggacgccggg
ctcaccatctggcggctcccccgcggcggattcgcggtcgggaggttcgccggtgggccc
agggagcagctgccggtcgtctacacggagctggacggtgggttcagcaacggggtcggc
ccaaggcgggtgacatggccggagggggaagggcaggtggacggcggcgaaggccggatt
cgccgtgtgtttaggaacctatttggctgcttcggtcggggcagcagccggccggagagt
tcctcgcagtcccgtagtggctga
DBGET
integrated database retrieval system
