Lolium rigidum (rigid ryegrass): 124698476
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Entry
124698476 CDS
T09103
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124698476
03036 Chromosome and associated proteins [BR:
lrd03036
]
124698476
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124698476
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124698476
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124698476
microRNA pathway
RISC loading complex
124698476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
124698476
NCBI-ProteinID:
XP_047086915
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All DBs
Position
3:complement(156660594..156665648)
Genome browser
AA seq
904 aa
AA seq
DB search
MDPHDELPPPPPLPPNVVPIKAEDGAKESPPNKPTKPTRLPIARPGLGKKGQPIQLLANH
FKVSVKSSDDFFHHYHVNLKYEDDQPVEGKGIGRKVIDKLQHTYRSELANKDFAYDGEKS
LFTVGALPQVTNEFTVILEDIGTGKSAANGSPSSPGGGDRKRVRRPYQTKTYKVELCFAA
KIPMAAIAMAIRGQESENSLEALRVLDIILRQHSAKQGCLLVRQSSFHNNPASFVDLGGG
VMGCRGFHSSFRGTQSGLSLNVDVSTTMIVKPGPVIDFLLANQKVDHPDRIDWPKAKRAL
KNLRIKAAPGNSEFKVVGLSDRKCNEQTFPWRQRNGNNGDTNIVEITVSDYFLRHKGIEL
RYSGNFPCIHAGRSKRPTYFPVELCTLVPLQRYTKALSTLQRSSLVEKSRQKPQERMSTL
NDALKRSNYDSDPMLMACGISIAPKFTQIEGRVLQAPKLRVGNGEDMLPRNGRWNLANKK
FLRTCSVTRWSVVNFSARCDVRGLVRDLKRLGAAKGIEIEEPYTVIEEIPSMRRARVSDR
VDKMIAEIKSKLPGLPKFLLCLLPERKNCEVYGPWKRKCLADFGIVTQCLAPTRVNDNYL
NNVLLKINAKLGGLNTLLQIEVSRTIPIVSEKPTIILGMDVSHGQPGQSDRPSIAAVVSS
REWPLVSRYRATVHTQSPKLEMMSSLFKPDGTADNGLIRESLIDFYTTSEQRKPDNVIIF
RDGVSESQFTQVINIELEQIIEACKFLDEKWEPKFTVIVAQKNHHTRFFQTGSPENVPPG
TVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFTADALQEFVHSLSYVYQRS
TTAISIVAPISYAHLAAAQVGTFMKFEDMSDASSSQGGHTSVGSVPVPELPRLHENVRST
MFFC
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcatgatgagttgccaccaccacctcctctacctcctaacgtggtgcccatc
aaagctgaagatggtgccaaggaatcgccaccaaacaagccaacaaagcctacgaggctc
ccaatagccaggcctggattgggaaagaaaggccagcccatccaactccttgcaaaccac
tttaaagtctctgtgaagagttcagatgactttttccaccactatcatgttaatctgaaa
tatgaggatgaccaaccagttgaagggaaggggataggcaggaaggtgattgataaactt
cagcatacataccgctccgagcttgcaaacaaagacttcgcctatgatggtgaaaagagt
ctcttcacagttggggctcttcctcaagtaacaaatgaattcactgtcatcttggaggac
ataggaactggaaagagtgctgccaatgggagtcccagcagtcctggtggtggggacagg
aagagagtgaggcgaccataccagacaaagacgtataaagtagagttgtgttttgcagca
aaaatcccaatggctgcaattgcaatggccattagaggtcaagaatcagagaactccctg
gaggctcttcgagttcttgatatcatactgaggcagcattctgcaaaacagggctgcctt
ttggttcgtcagtcatctttccacaacaatcctgctagcttcgttgacttgggcggtggt
gtgatgggttgccgaggatttcactcaagtttccgtggcacacagagtggcctctccctg
aacgtcgatgtttcaactacaatgattgttaagcctggtcctgttatcgactttcttctt
gctaaccagaaagttgatcaccctgacagaattgactggccaaaggctaagcgtgctctc
aagaacttgaggatcaaagccgctcctggaaattcagaattcaaggttgttggtttgagt
gacagaaaatgcaatgaacagacgttcccatggaggcagaggaatggtaacaatggagat
actaacattgtcgaaataacagtctctgattactttttgaggcacaaaggcatagagctc
cgatattctggtaatttcccctgtatccatgcggggaggtcaaagcgtccgacgtatttc
cctgtggagctttgcacgcttgttcctctgcaaagatataccaaagctctgtctacactg
caaaggtcctcgcttgttgagaaatccagacaaaagcctcaagaaagaatgtcaactctc
aatgatgcacttaaacgtagcaactatgactccgaccccatgctgatggcatgtggcatt
tcaattgcaccaaagtttactcagattgaagggagggttctgcaagcacccaagttgaga
gtcggtaacggtgaagatatgttaccacgcaatggacgctggaatcttgcgaacaagaag
ttccttcggacctgctctgtcacgaggtggtcggttgttaacttctctgcacggtgtgac
gttcggggtcttgtccgagacctcaaaaggcttggagctgcaaagggaatcgaaatagag
gaaccttatactgtgattgaagagatcccatcaatgagacgagcgcgtgtgtcggataga
gtggataagatgattgctgagataaaatccaagctacctggattacccaagttccttctg
tgccttcttcctgagaggaaaaactgcgaagtttatggtccttggaagaggaagtgtctt
gcggattttggcattgttacacaatgtctagctccaacaagagtaaatgataattaccta
aacaatgtcctgttgaagataaatgctaagcttggtgggctgaacacattgctgcaaatc
gaagtatcccgtacaattcctattgtgtcagagaagcctactatcatcttgggcatggat
gtgtcacatggtcaacctggtcagtctgatagaccttccattgctgcggtggttagttct
cgcgagtggcctctcgtctctagatacagagcaacagtacacactcagtcacccaaacta
gaaatgatgtcctccttgtttaagccagacggaactgccgataatggtctcattcgggaa
tcacttatcgacttttacactacttctgagcagcgaaaaccagataatgtcattattttc
agggatggtgtaagcgaaagccagtttacccaggtcataaacattgagcttgaacagatc
attgaggcatgcaagttccttgacgagaagtgggagcctaagttcacagtcattgttgcc
caaaaaaaccatcataccagattctttcagactggatctccagagaatgttccccccggt
accgtggtagataaacaagtctgccatcccaaaaatttcgacttctacatgtgtgcccac
gctggcatgattggaacctcaaggccaacacattatcatgttctgcatgatgagatcggc
ttcactgccgatgcgcttcaggaatttgtgcattctctttcttacgtgtatcagaggagc
acaacggcgatatctatcgttgctccgattagctacgcccatctcgcggcagcccaggtt
ggcacgttcatgaaatttgaagacatgtcggacgcgtcgtcaagccaaggagggcacacg
tctgtgggcagcgttccggttccggagctgcctcgtctccacgagaatgtccggagcacc
atgttcttctgctga
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