Lolium rigidum (rigid ryegrass): 124698477
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Entry
124698477 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124698477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124698477
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124698477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
YflT
Motif
Other DBs
NCBI-GeneID:
124698477
NCBI-ProteinID:
XP_047086916
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All DBs
Position
3:complement(156781546..156785608)
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AA seq
214 aa
AA seq
DB search
MAHFGRSGPPAIRDSFSLLVLNVSFRTTANDLFPLFDRCGDVVDIHIPRDRRTGDSRGFA
FVRYKYEDEAQRAVDKLDGRRVDGRDIMVQFAKYGPNAERIQKGRIVEEIPKPGGRPRSR
SPRPRYRDDYRDRDYRRRSRSRSADRYERDRPRDKDFRRRSLSRSVSPDYDRRHSRRSRS
PARRSPSRSRSNSPRAATPSKQGHHRSPRSQSPT
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacttcgggcgctccgggccgccggcgattcgcgactcattctccctcctcgtc
ctcaatgtctccttccgcacgacggccaacgacctcttcccgctcttcgaccgctgcggc
gatgtcgtcgacatccacatcccccgcgaccgcaggactggggattcacgggggttcgcg
ttcgtgaggtacaagtacgaggacgaggcgcagagggccgttgacaagcttgatgggagg
agagtggatgggagggatatcatggtgcagtttgccaagtacggccccaatgctgaaagg
attcaaaagggaaggattgtggaggaaattccgaagccagggggtcgccccagaagccgc
agtccaagaccgaggtatcgagatgattaccgggacagagactacagaaggagaagccgt
agccgaagtgcagatagatatgaacgggacaggcccagagataaagacttccgtcgccgt
agcttgagtcgcagtgttagccctgattatgacaggaggcatagcaggcggagccgctca
cctgcacggagaagccctagtcgtagcagaagtaactcacctcgggcagcaactcctagc
aagcaggggcatcaccgttctccacgctctcaaagcccgacctag
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