Lolium rigidum (rigid ryegrass): 124698630
Help
Entry
124698630 CDS
T09103
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124698630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124698630
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
124698630
SWR1 complex
124698630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
DBINO
Motif
Other DBs
NCBI-GeneID:
124698630
NCBI-ProteinID:
XP_047087065
LinkDB
All DBs
Position
1:322261972..322275027
Genome browser
AA seq
2158 aa
AA seq
DB search
MASKGPRSKLDHEARPKRKKAPEASKEPPKPKVHWDHVLGEMLWLSKEFEAERKWKLSMA
KKIAQKANLGVVDQATKDEKKQKEGEHRLRKVALNISKDVKKFWTKIEKLVLYKNHLEVE
EKKKKALDKQLDFLIGQTERYSTMLAENLVDVPHLQRLENGPLQTNLVSLEEVAEPSQAN
QPFQEEVAEPSHTNQPSQEEVAEPSQTNQPFQEEVAEPSQTNQPSQEEVAEPSQTNQPSQ
EEVTEENINAPTPDDLVTDKMETDDDYNSSSNEEQEDDERTIDEDEAQITEAERNEELAA
LQAEADLPLDDLLKMYTKAQVSRESSPTNKDTSSNSDLKNLIKDSSKQINGCNNHESGYS
SSDEGNDSEEANDRNCYTEFVKKNHGKTNGSFSSAEQEDKDYIGTDEGKDDEATLSEEEE
LAKKDDPDPLDEIKLLQKESEIPLEELLARYQKDGYADDETTDLENSPAYSSEDVNTHMS
PDGRSADNLELNNDTFENDETADMLVTEDVSGNALQLEEIVPEPNVQEEIVPEPGVQEEI
VSEPSVQEEIVAEPSLQEETVAAPSVHEEIVPEPSVHAEIVPEPSVQEEIVNVQENSVKE
DELTDAKVTADKETGDSVMADAAAAARSAQPTGNTFSTTSVRTKFPFLLKHSLREYQHIG
LDWLVAMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETE
FLKWCPAFKILTYFGSAKERKQKRQGWNKPNFFHVCITTYRLVIQDSKAFKRKKWKYLIL
DEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKD
WFCNPISGMVEGQDKVNKEVIDRLHNVLRPFLLRRLKRDVEKQLPQKIEHVIYCRLSRRQ
RNLYEDFIANSETQATLTSGNYFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGINMQI
SSSVCMVLDKGPFCQADLSDMNLVFTQNEFNMTSWEMDEVAALFSPGITSRGSGAEISCS
YKDGQRSNGTNIFEEIQKALQEERMKEAKERAASIAWWNRVRCQKRPVYGTNIREVLTIR
HPICDVFEKKNNPSCHMEFSSSLADLVLSSVERFNKMLGFIESFTFAIPAARAAAPICWC
KNRNSPVLLKPAYREQCMNEVSPILSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAVLLR
RLKSEGHRALIFTQMTKMLDTLEEFINLYGYTYLRLDGSTQPEERQTLMQRFNTNPKFFL
FILSTRSGGVGVNLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVNIYRLISESTIE
ENILKKANQKRALDDLVIQRGGYNTEFFKKLDPMEFFSGHTSVNAEAQEMDHTTTAVPSN
ETGLPLSNADVEAAIRQAEDEADYMALKKLEQEEAADNQEFSEEVAGRLEDDELVNEEDG
KPDEHTAEEHKHQSSDVDKDKSIALPMNQLDEEKALTLAVVDGDMDMLADVKQMAAAAAA
AGHASSSFENQLRPIDRYAMRFLELWDPVIDKAAVNYQVNVPEEEWELERIEKLKDDLEA
EIDEDQEPLSYETWDIDFATTAYHQHVEALAKKQLEEQEKQALEAAKELEETNEIVSSHR
KKSKKKKRKAGKFKSLKKGRLSSDSEAMLDETSVDTMSIDDNAPSPELMSNESPHQCSTK
RKKMTPGNEEVNSGSRSLKRFKKAPKSNGVSESSSHKNSLEGKRLKLKDEVNDSDPKLVR
TKNDGRVSIPCMPVKRVMVIKPERLKKKGLLWPRDCALDPWTTEEDAVLCGTVNEYGPVW
ELASEFIHSMPGGGLYRGRYRHPVHCCERFRELFCKHVLSATDNSNSEKAPSGAGKAILK
VSEDQTRMLLNVISETPNNELLLQKHFMAILSSVWRSKCGHEPQRVTSTSSSATHKPVIL
NENWSTTSNRPTFDLVRTALADAQAHCPRVVIPTSNPEPRRKSLELVLDFRTDQHAYEAG
FPSVVNVSILEPDPVKRAVVPVEQPLLSGHPHRHAEKRFRIAPESCFEGDGSHWASSAFH
IHDAARPKSGTKSTGKHKAASESGRPPKSKIQRTAEPHKALSVMHDFLRAPGRASTSAAE
FHFTWSLSDFGIDDSEFTYIDDELPLEADIEFAPHQYDPGSLPGIEELDPHADLTDIG
NT seq
6477 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaaaggtccacggtcgaagctggatcatgaggcaagacctaaacgcaaaaag
gctcctgaggcttcaaaggagcctccaaagccaaaggttcactgggatcatgttcttggg
gaaatgctttggctgtctaaggagtttgaagctgagagaaagtggaagttgtccatggct
aaaaagattgctcaaaaggccaatttgggtgtagttgaccaagcaacaaaggatgagaaa
aaacagaaggagggagaacatcgcctgagaaaggttgcactaaatatttctaaggatgtg
aagaagttctggaccaaaatagagaagctggttctctacaagaaccatctagaggttgag
gaaaagaagaaaaaggccctcgataagcagcttgattttcttataggtcaaactgaaaga
tattctactatgttggctgaaaacctcgtggatgttccccatttgcaaagactagaaaat
ggaccattgcagacaaatttagtatcccttgaggaagtagcagaaccttcacaggcaaat
cagccattccaggaggaagtagcagaaccttcacatacaaatcaaccatcccaggaggaa
gtagcagaaccttcacagacaaatcagccattccaggaggaagtagcagaaccttcacag
acaaatcaaccatcccaggaggaagtagcagaaccttcacagacgaatcaaccatcccag
gaggaagtaaccgaagagaacataaatgcgccaactcctgatgatcttgttacagataaa
atggaaaccgatgatgattacaatagctcctcgaatgaagagcaggaagatgatgagcgg
acaattgacgaggatgaagctcaaatcactgaggctgagcgcaatgaggaactagctgct
ttgcaggcagaagctgatctaccactggatgatcttctcaagatgtatactaaagcccaa
gttagcagggaaagcagtccaactaacaaagacacttccagtaactcagatttgaagaat
ttgattaaagattcttcaaaacaaataaatggctgtaataatcatgaatctggttatagt
tcaagtgatgaaggcaatgattctgaggaagctaatgatcgcaactgttacaccgagttt
gtgaagaagaatcatgggaaaaccaatggcagtttctcctctgctgagcaggaggacaaa
gattatattggtactgatgaaggaaaggatgacgaggcaactttatctgaagaggaagag
ttggcaaagaaagatgaccccgatcctttggacgagattaagttactgcagaaagagagc
gagatcccactagaagaacttcttgcaaggtaccaaaaggatggctatgcagatgacgaa
acaacagatttggagaattcacctgcatattctagcgaagatgttaacactcacatgtct
ccggatggtcgatctgctgacaatttggaactgaacaatgacacatttgaaaatgatgag
acagcagacatgctggtaactgaggatgtgagcggtaatgccctacagctagaagaaata
gtaccagagcccaatgtacaggaagaaatagtgccagagcctggtgtacaggaagaaata
gtgtcagagcctagtgtacaagaagaaatagtggcagagcctagtctacaagaagaaaca
gtggcagcgcctagtgtacatgaagaaatagtgccagagcctagtgtacacgcagagata
gtgccagagcctagtgtgcaagaagaaatagtaaatgtacaagaaaattctgttaaagaa
gatgagctgactgatgctaaggtgacggctgataaggaaactggtgacagtgtaatggct
gatgctgctgctgctgcaagatcggcacaaccaactgggaacaccttctcaacaacgagc
gtacgcacaaaattcccattccttctcaagcattctcttcgggagtaccagcatattggg
ttggactggttggttgctatgtatgaaaagaggctgaatggaattctagcagatgaaatg
ggtttggggaagacaatcatgactatctctttgctggcgcaccttgcatgtgagaagggg
atatggggcccacatcttattgttgtgccaaccagtgttatgttaaattgggagactgaa
tttctgaagtggtgccctgcctttaaaatactgacttattttggaagtgcaaaggagaga
aaacagaaacgtcagggttggaataaaccaaattttttccatgtatgcatcacgacatac
aggcttgttattcaggactctaaagctttcaagcgaaaaaagtggaagtatcttatcctt
gatgaggctcatctgataaagaactggaaatcacaaagatggcagactctgctcaatttt
aattcaaaacggcgtattcttttgacaggaactcctttgcaaaatgaccttatggaactt
tggtctctcatgcattttttgatgccacatgtattccagtctcaccaagagttcaaggat
tggttctgcaatccaatttcaggaatggtggagggccaggacaaggttaataaggaagtt
atagataggttgcacaatgtccttcgtccatttctattacgccgattgaaaagagatgtt
gagaaacagttaccacagaagattgagcatgtcatatattgtcgactttccagaaggcaa
aggaacttgtatgaagattttattgccaactcagagacacaagcaacactgacaagtggg
aattatttcggtatgattagtatcattatgcaacttagaaaggtctgtaaccatccagat
cttttcgaaggccgtccaattatcagctcatttgacatggcaggaattaacatgcagatc
agctcttcagtgtgcatggtccttgataaggggcctttttgtcaggccgacctctctgat
atgaaccttgtatttactcaaaatgaatttaatatgacttcttgggaaatggatgaggtt
gctgctctcttttctccaggcataacctctaggggctctggtgcagagatttcctgctct
tataaggatggtcagagaagtaatggaacaaatatttttgaagaaattcagaaagccttg
caggaggagagaatgaaagaagccaaagaaagagcagcttcaattgcatggtggaataga
gtaagatgccagaaaaggcctgtttatggtacaaacattagggaggttctgaccataaga
catcctatctgtgatgtttttgagaagaagaataacccttcgtgccacatggagttttca
tcgagtctagcagatcttgttctttcatcagtggaacgattcaataaaatgcttggcttt
attgaatcatttacttttgcaattcctgctgcacgggctgctgctcctatttgctggtgc
aaaaataggaattctcctgttcttcttaaaccagcatacagagaacaatgcatgaatgag
gtctcgcccattctctctcctataagacctgcaatcgttcgccgtcaagtttactttcct
gacaggcgcttgatccagtttgactgtgggaagttgcaggagcttgctgtcttgctgaga
cgtttgaagtcagaggggcacagggccttgatatttacacagatgactaagatgcttgat
actttggaggaattcattaatttgtatgggtacacatatttgcggttagatggctctacc
cagccagaagagagacaaacactaatgcagaggtttaatacaaacccaaagttttttctc
ttcattttatccactcgtagtggtggtgtgggagttaacctagtaggcgcagacactgtt
atattctatgatagtgattggaaccctgcaatggatcaacaagcccaagacagatgtcac
aggataggacaaacacgtgaagttaacatctatagactaattagtgagagcactatagag
gagaacattctcaagaaagcaaatcagaagcgagcacttgatgatttagtaattcagcgc
ggtggttacaatacagagttcttcaagaaactagaccctatggagttcttttctgggcac
acatctgtcaatgccgaagctcaggagatggatcacactacgactgctgtaccctcaaat
gaaactggtctgcctctgtcgaacgcagatgttgaagcagctattagacaggcagaagat
gaggctgactatatggctcttaaaaaactggagcaggaagaggctgcagacaatcaagaa
ttcagtgaggaggttgctggacggctagaggatgatgagcttgtaaatgaggaggatggg
aaacctgatgagcacactgctgaagagcataaacatcaatcttctgatgtggataaggac
aaaagtattgctttacccatgaaccagttagatgaagaaaaggctcttacactggctgtg
gttgacggagatatggacatgcttgctgacgttaagcagatggctgctgcagctgctgca
gcaggacacgcgagttcatcttttgaaaatcagctccggccaatcgatagatatgcaatg
cggtttttggagctctgggatccagtgattgacaaagctgctgtaaactatcaggtgaat
gttccagaggaagaatgggaacttgaacgcattgaaaaactcaaagatgatttagaagca
gaaattgatgaagaccaggaacctctatcgtacgagacatgggatattgattttgctact
acagcgtatcaccaacatgttgaggctctagctaaaaagcagttggaagaacaggaaaaa
caagctcttgaagcagcgaaagagttggaggagaccaatgaaatagtcagcagtcaccgc
aaaaagtcgaagaagaagaaaaggaaggcaggcaagtttaagtccttaaaaaaggggcgt
ttgtcatcagattcagaggccatgcttgatgaaacgtctgtagatactatgagtattgat
gacaatgcaccttcgccggagcttatgagcaatgaatcaccgcaccaatgttctactaag
cgtaaaaagatgacgcctggaaatgaggaagtgaacagtggtagcagaagcctgaagagg
tttaagaaagcccccaaatcgaacggtgtttcggagtcctcatcacataaaaactcgctc
gaaggcaagcggctgaagctgaaggatgaagttaatgattctgatccaaagttggtgaga
actaagaatgatggtcgggtttccatcccttgcatgccagtaaaacgtgttatggtaatt
aagcctgagaggttgaagaagaagggtcttctatggcctcgggattgtgcattagatcca
tggactactgaagaagatgcagttctttgtggaactgtaaatgagtatggtcctgtttgg
gaactggctagtgaatttattcactccatgccaggtggtggactttacaggggaaggtat
cgtcatcctgtgcattgctgtgagagattccgagaattgttctgcaaacatgtattgtca
gcaactgacaattcaaacagcgagaaggctccttctggtgccgggaaggctatcttgaaa
gtatcggaggatcaaactcggatgttgttgaatgtgattagtgaaactcctaacaatgag
ttgcttctccagaaacatttcatggccatactttcttctgtttggagatcaaaatgtggt
catgagccccaacgtgttacaagtactagctctagtgcaacccataagcctgttatattg
aacgagaactggtccacgacaagtaacaggccaacctttgatcttgtaaggacagctctc
gcagatgctcaggcccattgtccaagggtggtaataccaacaagcaatccagagcctcgt
aggaaaagtttagaattggtgttggatttccggacagatcaacatgcttacgaagcaggc
ttcccgtctgttgtgaacgtgtccattctagaaccagatcctgttaagcgcgccgttgtg
cctgtggaacaaccgctgctttctggacatcctcatagacacgctgagaaaagattcagg
atagcaccagaatcttgttttgaaggggacggttctcactgggcatcatctgctttccac
atacatgatgctgctcggcccaaatctggcacgaagtccactgggaagcacaaggcagct
tcagaatcaggaagacctccaaaatcgaagatccagaggactgcagaaccgcacaaagcg
ctgtctgttatgcatgacttcctccgggccccaggtcgagcttcgacaagtgcagctgag
ttccacttcacgtggtccctgtctgactttggcatcgacgattccgagttcacctacatc
gatgatgagcttcctctagaggctgacatcgagttcgccccgcaccagtatgaccctggc
tcacttcctggcatcgaggagttggatcctcatgcagatttgacagacatagggtga
DBGET
integrated database retrieval system
