Lolium rigidum (rigid ryegrass): 124698810
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Entry
124698810 CDS
T09103
Name
(RefSeq) probable CoA ligase CCL6 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00061
Fatty acid biosynthesis
lrd00071
Fatty acid degradation
lrd01100
Metabolic pathways
lrd01212
Fatty acid metabolism
lrd04146
Peroxisome
Module
lrd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124698810
00071 Fatty acid degradation
124698810
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124698810
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lrd01004
]
124698810
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124698810
Enzymes [BR:
lrd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124698810
Lipid biosynthesis proteins [BR:
lrd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124698810
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of breast milk
124698810
Exosomal proteins of breast cancer cells
124698810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124698810
NCBI-ProteinID:
XP_047087184
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Position
3:complement(196889557..196894274)
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AA seq
661 aa
AA seq
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MEEAMYTVKVGEATPAGSGRASAGPVYRSIYAKDGLMQLPQEIQSPWDFFSGAVKKYPNN
RMLGRRKVSDGKAGDYVWHTYEQVYQKVTKIGAAIRSFGVKPGAHCAIYGSNCPEWVMAM
QACNSQGICYVPLYDTLGENAVEFILDHAEISIAFLQESKIKSILAVLPKCTAHMKAIVS
FGDVTNELKREVEKLGVSCFSWEEFSTMGEEIYELPKKQDDICTIMYTSGTTGEPKGVII
TNRAIVAGVTTTEQLLELTDKVVDEYDSYFSYLPLAHIFDQVIENYCISKGASIGFWQGD
IMYLMEDVQVMKPTIFCGVPRVYDRIYTGINQKIQSGGLIAKHLFQYAYTYKLGNLKKGF
KQHEASPFFDKIVFSKIKEGLGGRIRLMLSGAAPLPRHIEEFMRVTGCSVLAQGYGLTES
CAGCFTSIANVFSMIGTVGPPVTAIEARLESVPEMGYDALSNAPRGEICLRGHTMFSGYY
KHPDLTEEVFSDGWFHTGDIGEWQPDGTMKIIDRKKNIFKLSQGEYVAVEVVESAYVQSP
LVASVWVYGNSFESFLVAVVVPEKQAIEDWAALNGMSGDYAEFCNDPKARRYIQDELNKT
GKKLGLRGFEMLKAVHLDPVPFSIDKDLITPTFKLKRPQLLKYYKDRVDQLYKDAKMGTA
Q
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcgatgtacactgtgaaggtgggtgaggcgacgccggccggcagcggcagg
gcatcggccggacccgtctaccggagcatctacgccaaggacggcctcatgcagcttccc
caggaaatccagtccccatgggacttcttcagtggggcagtgaagaagtaccccaataac
agaatgcttggccggcgcaaagtttcagatggcaaggctggtgactatgtgtggcatacg
tatgaacaagtgtaccagaaggtcaccaagattggggcagctatcagaagcttcggcgtt
aagccgggggctcattgtgccatatatggatccaactgccctgaatgggtcatggccatg
caggcctgcaatagccaaggaatttgttatgtaccactgtatgacacacttggagaaaat
gcagttgaattcatcttggaccatgctgagatctctatagcttttttgcaggagagcaag
ataaaatccattctagcagtactcccaaagtgtactgcccacatgaaagctattgttagt
tttggagatgtgacaaatgagctgaaaagggaagttgaaaaattaggagtatcttgcttt
tcttgggaggaattttctacaatgggagaagaaatctacgaacttcctaagaaacaggac
gacatttgtacaatcatgtataccagtggaacaacaggagagccgaagggtgtgataatc
acaaacagggctatagtagccggggttacgaccacagaacagctccttgagttaacagat
aaagtggttgatgaatatgattcatacttttcttatcttccgttagctcacatattcgat
caagttattgagaattactgcatctctaaaggtgcctccattggattctggcaaggggac
attatgtatctgatggaggatgtgcaagtgatgaaaccaacaattttctgtggtgttcct
cgcgtttatgatcgtatatacacaggtatcaaccagaaaattcagtctggagggctgata
gccaaacacctttttcagtatgcttacacctacaaacttggcaatttaaagaaagggttc
aaacagcatgaagcttcgccatttttcgataaaatagtcttcagcaaaataaaggaaggt
cttggtggccgcatacgcctcatgctatcaggcgcggcacctctaccaaggcacattgaa
gagttcatgcgagtcacaggctgcagcgtcctcgcacaaggatatgggctcactgagagt
tgtgcaggatgctttacgtccatcgccaatgttttctcgatgattgggacagttggccct
cctgtgacggcaatcgaggcgaggttggagtctgttcctgaaatgggctatgacgcgctc
tccaatgcaccgcgcggtgagatctgcttgaggggtcacaccatgttctccggctactac
aagcaccctgacctcaccgaggaagtgttctcagatggttggttccatacaggcgatatc
ggagagtggcaaccagatggcacaatgaagatcattgacagaaagaagaacatcttcaag
ctgtcccaaggagagtatgtagcagtggaggtcgtggaaagcgcatacgtccaatctcca
ctcgttgcatcggtttgggtctatgggaatagcttcgagtccttccttgttgctgtggtt
gtccctgagaagcaggctattgaggactgggctgcacttaacggcatgtctggtgactac
gcagagttctgcaatgatccgaaggctaggaggtacatccaggatgagctgaacaaaact
ggcaagaaactcgggttaagaggatttgagatgctgaaggcagttcacctggacccagtg
ccattcagcatagacaaggacctgatcactccgacttttaagctcaagaggcctcagctg
cttaaatattacaaggatcgcgttgatcagctgtacaaggatgccaagatgggaactgca
caatga
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