Lolium rigidum (rigid ryegrass): 124698953
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Entry
124698953 CDS
T09103
Name
(RefSeq) SEC12-like protein 2
KO
K14003
prolactin regulatory element-binding protein
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124698953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124698953
Membrane trafficking [BR:
lrd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124698953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_IFT140_1st
DUF7165
RMC1_N
CFAP43_N
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
124698953
NCBI-ProteinID:
XP_047087289
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Position
3:complement(214552071..214555972)
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AA seq
394 aa
AA seq
DB search
MASRGGGQTYGFPIYCASWLPLAHILKPSADDAAEADAPSPAPAPPPRPMVTLGGGGGEG
NSGVPNALVVAAVDPATAGAPPALSPEPVFRLQTGQQVPYRMSVHPHGHGVVCAFPNGCR
LLRWELPEGEDPHRLELRSDEEALATLSDVGLQLAVSFSEAGSLLATGGEDGHLRVFRWP
TMETIVEEPDTKTSVKDLSFSSDERFLAVNRSSGPSKVWDLRSAEAVANLPREAGEMFGF
CRFLNKPDNSQILFVTAMQGDYGKIISWNTTTWTRIGSKKITREAISAFAVSPDGTLLAF
GTIEGSISVLGSRDMRVLVKVKKAHLGIVTTLAFSQDSRTLLSTSFDSTARLTSTAPPKS
TGVSLWSMILAIVLAILVYYYMQHKEDLLAMLPK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgcggcggcgggcagacctacggcttccccatctactgcgcctcctggctc
ccactcgcccacatcctcaagccctccgccgacgatgccgccgaggcggacgcgccctct
ccggccccggcccctcccccgcgccccatggtgaccctcggcggaggtggcggcgaggga
aatagcggcgtgcccaacgcgctggtcgtcgccgcggtcgaccctgccacggcgggggcg
cccccggcgctctcccccgagccggtgtttaggctgcagacgggtcagcaggtgccatac
aggatgtctgtccacccccatggccacggcgtcgtctgcgccttccccaacggctgcagg
ttgttgcgatgggaattaccagaaggagaggatccacacagactagaattgagatctgac
gaagaggctttagcgacgctaagtgatgttggtttacagttggcggtgtcattcagtgaa
gcgggctcactacttgcaactggtggtgaggatgggcatttaagggtcttcagatggcct
accatggaaaccattgtcgaagaacctgatactaaaacatctgttaaggatcttagtttc
agttccgatgagaggtttttagctgtaaataggagcagtggcccatctaaagtgtgggat
ttaaggtcagctgaagctgtggctaatctgccaagagaagctggagaaatgtttggattc
tgcagatttttaaataagcccgacaacagtcagatcctctttgttacagcgatgcaaggt
gattatggaaaaataatatcttggaatactaccacatggacaagaattggatcgaagaaa
ataactcgtgaggcgatttcagcatttgctgtctcgcctgacggtacacttctagcattt
ggaactattgagggaagcatcagcgtacttggctcaagagacatgcgagtgcttgtaaaa
gttaagaaggcacatcttggcattgttactacgttggctttctctcaagactcaaggacc
ttgctgtcgacttccttcgactcaactgcaaggctcacatcgactgcacccccaaagagt
acaggtgtgagcctgtggtccatgatactagctatcgtactcgcaattttggtatactac
tatatgcagcacaaagaagatctcttggcaatgttgccgaagtga
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