KEGG   Lolium rigidum (rigid ryegrass): 124699170
Entry
124699170         CDS       T09103                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03083  Polycomb repressive complex
lrd04120  Ubiquitin mediated proteolysis
lrd04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124699170
   04120 Ubiquitin mediated proteolysis
    124699170
  09126 Chromosome
   03083 Polycomb repressive complex
    124699170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lrd04131]
    124699170
   04121 Ubiquitin system [BR:lrd04121]
    124699170
   03036 Chromosome and associated proteins [BR:lrd03036]
    124699170
Membrane trafficking [BR:lrd04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    124699170
Ubiquitin system [BR:lrd04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     124699170
   Cul7 complex
     124699170
Chromosome and associated proteins [BR:lrd03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     124699170
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     124699170
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 124699170
NCBI-ProteinID: XP_047087469
LinkDB
Position
3:238192254..238198697
AA seq 163 aa
MADAAERKRTLRSSDGEEFEVEEVLVLESQTIKHMIEDECDGVIPLPNVSAKILSKVIEY
CRKHVQTRAALAPDGDMSTNAAGTELKTFDEDFVKVDQATLFDLILAANYLNIKGLLDLT
CQTVADMIKGKTPEEIRATFNIKNDFTPEEEEEVRKENAWAFE
NT seq 492 nt   +upstreamnt  +downstreamnt
atggcggacgcggcggagaggaagcgcaccctgcggagctccgacggcgaggagttcgag
gtggaggaggtgctggtgctggagtcgcagaccatcaagcacatgatcgaggacgagtgc
gacggcgtcatcccgctccccaacgtcagcgccaagatcctctccaaggtcatcgagtac
tgcaggaagcacgtccagacgcgcgccgccctcgcccccgacggcgacatgagcaccaac
gccgccggcaccgagctcaagaccttcgacgaggacttcgtcaaggtcgaccaggccacc
ctcttcgacctcatcctggctgcaaactacctgaacatcaaggggctgcttgacctgacc
tgccagacggtggctgacatgatcaagggcaagaccccagaggagatccgcgcgaccttc
aacatcaagaacgacttcaccccagaggaagaggaggaagtgcgcaaggagaacgcgtgg
gcgttcgagtga

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