Lolium rigidum (rigid ryegrass): 124699250
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Entry
124699250 CDS
T09103
Name
(RefSeq) alpha-L-arabinofuranosidase 1-like
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00520
Amino sugar and nucleotide sugar metabolism
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
124699250
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
124699250
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Gene cluster
GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
Motif
Other DBs
NCBI-GeneID:
124699250
NCBI-ProteinID:
XP_047087533
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All DBs
Position
3:245991833..245998981
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AA seq
659 aa
AA seq
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MGTDNAATCRTVLCTLLLLTLTCDCLAADLDLAKTAVLEVNTSWVAARKIPQTLFGLFFE
EINHAGAGGIWAELVSNRGFEAGGINTPSNIDPWSIIGDESSIYVQTERASCFSKNIIAL
RMEVHCDECPAGSVGIYNPGFWGMNIEEGKTYNLVMYIRSMEPVELTASLTCFDGLQNIA
SADIVDNNVSDWRKIELQLFSRGTCRTSRFELTTSKRGVIWIDQVSLMPSDTYKGHGFRK
ELIHILMDLRPQFLRFPGGCFVEGEWLRNAFRWRETIGPWEERPGHYGDVWKYWTDDGLG
YYEFLQLAEDLGAEPIWVFNAGISHNDEVDTTTLAPFVEDVLNSIEFARGSSESTWGSIR
AAMGHSERFPLKYVAIGNEDCEKQLYQGNYLMFYNAIRVAYPDIQIISNCDGSSKPLHHP
ADLYDFHVYSNATFIFLMKDKFTRTSRKGPKVFVSEYAVNDATDAGNGSLLASLAEAAFL
IGLEKNSDIVHMASYAPLFVNDNDRSWNPDAIVFNSWQQYGTPSYWMQTFFRESSGSVIH
PVRIASSYSSSLAASAITWKDNEDMFLRIKIVNFGSHAVNLTISATGLQAGVDTARSTVT
VLTSSDLLDENSFSDPNKVVPVRSGLPGAAEKMQALLVPYSLTSFDLALDQYGGLVAEM
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagataacgcggcaacatgccgcaccgtcctctgcaccttgctactactcacg
ttgacctgcgactgcctggcggcagacttggatctggctaagacggcagtgctagaggtt
aacacgtcatgggtagccgccagaaagatccctcagaccctctttgggttgttctttgag
gaaatcaaccacgctggagctggaggaatttgggcggagcttgtcagtaacagaggattt
gaagcaggagggattaacactccttcaaacatagatccttggtccatcattggggatgaa
tcttccatatacgtgcagactgaaagagcatcttgtttcagtaaaaatatcattgctcta
aggatggaggttcattgcgacgagtgtccagctggcagcgttggaatttataacccagga
ttctggggcatgaatatagaagaagggaagacctataatctagtcatgtatatcagatca
atggaacctgtggagttgactgcttcactcacatgtttcgatggattacaaaatatcgca
tcagctgatatagtagataataatgtgtcagattggcgaaagatagaactccaattattt
tctcgaggaacatgcagaacttcaagatttgagttaacaacttccaagaggggggtcata
tggatagatcaagtgtcacttatgccttcagatacatataagggccatggctttcgcaag
gaactcatacacatacttatggatttaagaccacagttcctacgatttcctggtggttgc
tttgttgaaggcgagtggttaagaaatgctttcagatggagggaaactattggtccatgg
gaagagaggcctgggcactatggagacgtttggaagtactggacagatgatgggcttggg
tattacgagtttctccagcttgccgaagaccttggtgctgagccaatctgggttttcaat
gctgggatcagccacaatgatgaagttgataccactacacttgcaccttttgtagaggat
gtattgaacagtattgaattcgctagaggaagttcagaatcaacctggggttccattaga
gctgcaatggggcactctgaacgattcccgttgaagtatgttgcaattgggaatgaagat
tgtgaaaaacaactttaccagggaaattatctcatgttttataatgcaattcgagtggcc
tatccagatattcaaattatttcaaactgtgatggctcatctaagccacttcaccaccct
gctgatttatatgattttcatgtctatagcaatgccacttttatttttctcatgaaagat
aagtttaccaggacatcacgcaagggtccaaaggtatttgttagtgagtatgctgttaac
gatgcaacggatgctggcaatggaagccttcttgcttcattggcagaggctgcgttcctt
attgggttagagaagaatagtgatatcgtccacatggcgagctatgctccactcttcgta
aatgacaatgaccgctcctggaacccagatgcaatagtcttcaactcctggcaacagtat
ggaactcctagttactggatgcagacatttttccgtgaatcaagtggttctgtgatccat
cctgtgagaatcgcttccagctactctagttcattggcagcatctgcaatcacctggaaa
gacaatgaggatatgttcctgaggataaagattgtaaactttggttcgcatgctgtaaac
ctaacaatatctgcaactggacttcaagctggtgtcgatacggcaagatcaactgtgact
gttctcacatccagtgatttgcttgatgaaaactcgttcagtgacccaaataaggttgtg
ccggttcgcagcggtctacccggtgctgcagaaaagatgcaggccttgctggttccgtac
tcgctcacatcctttgacctggctctggatcagtacggcgggctggtagctgagatgtga
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