Lolium rigidum (rigid ryegrass): 124699365
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Entry
124699365 CDS
T09103
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124699365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124699365
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124699365
mRNA degradation factors
5'-3' decay
Decapping complex
124699365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
CdiI_2
WH1
Motif
Other DBs
NCBI-GeneID:
124699365
NCBI-ProteinID:
XP_047087634
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All DBs
Position
3:complement(256902798..256906198)
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AA seq
368 aa
AA seq
DB search
MPPPPMPPPSNGGKVTPNLAMDAEGTRLLNLTVLQRLDPAVEDILITAAHVTLYDFNIDL
NQWSRKDVEGSLFVVKRNTQPRFQFIVMNRRNTDNLVEDLLSDFEYELQPPYLLYRNAAQ
EVNGIWFYNQQDCDAVANLFGRILNAYARVPPKAKVPSAISEFEELEAVPTSAAIDGPLE
PPPASTLISDTPDESLANYFSGAASIGGLSSAPMVGRAHPSTESTASSHMTIHSAAPVHQ
IPPPLGGSSAPPLPLQDTHAGHSTNLLTPAFFAPPSSSSASLAPPASSMMPTAPPLHPTS
VSAQYPQYGHGTPLLQPFPPPAPPPSFAPAHNEGPMISRDKVKDALLRLVQSDEFIDLVY
RELQNAHM
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgcccatgccgccgccgtccaacgggggcaaggtcaccccgaacctggcc
atggacgccgagggcacgcgcctgctcaacctcaccgtcctgcagcgcctcgaccccgcc
gtcgaggacatcctcatcaccgccgcccacgtcaccctctacgacttcaacatcgacctc
aaccaatggagccgcaaggacgtggaggggtcgctgttcgtcgtcaagaggaacacccag
ccgaggttccagtttatcgtcatgaacaggcggaacacggataatctcgtggaggattta
ttaagtgattttgaatacgaacttcagcctccatatttgttgtaccgtaatgctgcacaa
gaagtaaatggtatttggttttacaatcaacaggactgcgatgctgtagcaaatcttttt
ggaaggatactgaatgcttatgccagagtgcctccaaaagcaaaagtcccttccgccata
agcgagttcgaggaattggaggctgttcctacatctgctgcaatagatggaccccttgaa
cctccgccagcatctacgcttatctctgatactcctgatgaatcacttgccaattacttt
agtggcgctgcaagtatcgggggtttatcaagtgcgccaatggtcggaagagctcatcca
tccacggagagcactgcatcttcccacatgactattcattctgctgctccggtgcatcaa
ataccccctcctttagggggttcatcagctccaccactgcccctccaggacacccatgct
ggccattccacaaatctcttaacaccggcattctttgcacctccctcgtcgtcttctgca
tcattagcgccgccagcttcctcaatgatgccgactgcaccgcctcttcatccaacttca
gtatctgctcaataccctcagtatgggcatggcaccccgctactccaaccttttccacca
cctgcaccgcctccttcctttgcccctgcacacaatgaaggtcccatgatttcgcgggat
aaagttaaggacgcccttctgagacttgttcagagtgatgaattcattgatttagtttat
cgggagttgcagaatgcacatatgtag
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