Lolium rigidum (rigid ryegrass): 124699442
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Entry
124699442 CDS
T09103
Name
(RefSeq) histone-binding protein MSI1 homolog
KO
K10752
histone-binding protein RBBP4
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03082
ATP-dependent chromatin remodeling
lrd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124699442
03083 Polycomb repressive complex
124699442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124699442
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
124699442
Histone modification proteins
HAT complexes
HATB complex
124699442
HDAC complexes
Sin3A-HDAC complex
124699442
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
124699442
PRC2.2
124699442
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
124699442
Heterochromatin formation proteins
Other heterochromatin formation proteins
124699442
Chromatin remodeling factors
NuRD complex
124699442
NuRF complex
124699442
NuRF complex (fruit fly)
124699442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
NBCH_WD40
MIOS_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
124699442
NCBI-ProteinID:
XP_047087698
LinkDB
All DBs
Position
3:267323241..267329908
Genome browser
AA seq
435 aa
AA seq
DB search
MPKAGGGGGGGEEEEFRAEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPD
RAEPAGKDHSVQKMILGTHTSDNEPNYLMLAQVQLPLDDAEADARHYEDDHADVGGFGAA
SGKVQIVQQINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDL
RLKGHNSEGYGLSWSVFKEGHLLSGSDDAQICLWDIQSNGQKKTLDAFQIFKYHDGVVED
VAWHLRHEYLFGSVGDDHHLLIWDLRSPSPTKPVQSVVAHQGEVNCLAFNPFNEWVVATG
STDKTVKLFDLRKIDTSLHTFDCHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDQ
EQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVLASVAEDNILQIWQMAENIYHDE
DDLPSDEPAKASLNP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggccggcggcggcgggggcggcggcgaggaggaggagttccgcgccgaggtg
gaggagcggctcatcaacgaggagtacaagatctggaagaagaacacgcccttcctctac
gacctcgtcatcacccacgcgctcgagtggccctccctcaccgtccagtggctccccgac
cgcgccgagcccgccggcaaggaccactccgtgcagaagatgatcctcggcacccacacc
tccgacaacgagcccaactacctcatgctcgcccaggtccagctcccgctcgacgacgcc
gaggccgacgcgaggcactacgaggacgaccacgccgacgtcggagggttcggggccgcg
tcaggaaaggtgcaaatagttcaacagataaatcatgatggagaagtgaaccgagctcga
tatatgccccaaaattcatttataattgctaccaagacagtcagtgcagaagtgtatgtc
tttgattatagcaagcacccatcaaagcctccgctagatggtgcatgcaatcctgattta
cgtctgaagggacacaactctgaaggatatggcttgtcttggagtgtctttaaagagggc
catttgctgagtggatctgatgatgcccaaatttgcttatgggacatccaatcaaatggt
caaaagaaaactcttgatgcatttcagatctttaagtatcatgatggcgtcgttgaagat
gttgcttggcatttgaggcatgaatacttatttggctcagtcggtgacgatcatcatctg
ctaatttgggatttacgtagtccttcacctaccaagcctgtacagtctgtggtggcacac
cagggtgaggtgaactgcctggctttcaatcctttcaatgaatgggttgttgcaactggt
tcaactgacaagactgtaaaattatttgatcttcggaagattgacacttcgctgcacacc
tttgactgtcataaagaggaagtatttcaagttggatggagcccaaagaatgaaactata
cttgcatcttgttgtctgggcagaaggctgatggtttgggatctaagcagaattgatcag
gagcaaacaccagaagatgcggaggatggccctcctgagctcttgttcattcatggaggc
catacaagcaaaatctccgacttctcctggaacccgtgtgaggactgggtgcttgctagc
gttgctgaagacaacatccttcagatatggcaaatggcggagaacatctaccatgatgag
gatgaccttccgagcgatgagccggcaaaggcttctttaaacccttga
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