Lolium rigidum (rigid ryegrass): 124699535
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Entry
124699535 CDS
T09103
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124699535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124699535
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124699535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF5769
Motif
Other DBs
NCBI-GeneID:
124699535
NCBI-ProteinID:
XP_047087780
LinkDB
All DBs
Position
3:275815376..275819517
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AA seq
291 aa
AA seq
DB search
MEVEAYRRLFPLAFLERHLRESVRPDARRLGEARATTVALGAVSSAHGSALVRLGDTAML
ASIKLEVMSPPAETPDEGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGML
NLKELCLISGKASWVAYLDVYCLNADGSLFDAALISVVAAFSHLEIPLVSVGDDGRVFTV
GGNEGKTKYELVNREKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSVTVVLDSS
GRLVSIQKPGGGVASMSTIKACISLAKERGQKLKEILMDSVEATMEVDQTE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaggcctaccgccgcctcttccccctcgcgttcctcgagcgccacctccgc
gagtccgtccgacccgacgcccgccgcctcggcgaagcccgcgccaccaccgtcgcgctc
ggcgccgtctcctccgctcacggctccgccctcgtccgcctcggcgacaccgccatgctc
gcgtcgatcaagctcgaggtgatgtcgccccccgcggagaccccagatgagggatctgtc
gctgtggagtttcacatgccgccaatctgctccccgcttgtaagaccaggacggccagca
gaggctgcgccggtcatttccaaggctctggaggatgtcctcatgagctctgggatgcta
aatttgaaggagctctgtttgatcagcgggaaggcttcatgggtagcatacctggacgta
tattgtttgaatgctgatggatctctatttgacgctgcattgatctcagtggtggctgca
ttttcacacttggaaatccctctagtatctgttggtgacgatggcagagtatttactgtt
ggaggcaatgaaggcaaaaccaaatatgaattggtaaacagagaaaagaggaagcttact
cttggggacattccatttcccctgacatgtgcacttcacaaggatagtattctagtggac
ccaactgctgaagaagaatcaataatagaaacctctgtgactgttgttctagattcttca
ggccgcttagtatcaatacaaaaacctggaggtggagtggcatccatgtcaactattaag
gcgtgcattagcttggcgaaagaaaggggacaaaagttaaaagaaatactcatggactcc
gttgaagcaacaatggaagtcgaccaaactgaataa
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