Lolium rigidum (rigid ryegrass): 124699582
Help
Entry
124699582 CDS
T09103
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.8-like
KO
K14487
auxin responsive GH3 gene family
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124699582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
AIG2_2
Motif
Other DBs
NCBI-GeneID:
124699582
NCBI-ProteinID:
XP_047087815
LinkDB
All DBs
Position
3:complement(281205778..281208252)
Genome browser
AA seq
609 aa
AA seq
DB search
MAVMTDMPAVTALRAPASTAAAAGNHKDAEKLRFIEEMTSDVDAVQERVLAEILAQNAET
EYLARCGLDGATDRDSFRAKVPVVTYEDLQPDIQRIANGDRSAILSAHPISEFLTSSGTS
AGERKLMPTIKEELNRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETTTPGGLTARP
VLTSYYKSDQFKNRPYDPYHVYTSPTPAILCADAFQSMYVQMACGLCQRHDVLRVGAVFA
SGLLRAIRFLQLHWEQLAADIEAGSLTPRVTDPAIREAVAGILRPDAELASFVRAECSRG
DWGGIITRVWPNTRYLDVIVTGAMQQYIPTLEYYSGGLPMACTMYASSECYFGLNLRPMC
HPSEVSYTIMPNMGYFEFLPIDEASGDVASGDAAHLVDLAKVEAGREYELVITTYAGLNR
YRVGDILRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVERASALLRPHGASVV
EYTSHASTKSIPGHYVIYWELLTKCGGDSAIAGNVLDRCCLEMEEALNTVYRQSRVADGS
IGPLEIRVVRGGTFEELMDYAISRGASINQYKVPRCVSFPPIVELLDSRVVSAHFSPALP
HWAPARRSD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcatgacggatatgccggcggtgacggcgctgcgtgccccggcatccaccgcc
gccgcggcggggaaccacaaggacgccgagaagctcaggtttatcgaggagatgacctcc
gacgtcgacgccgtgcaggagcgcgtcctcgccgagatcctcgcgcagaatgccgagacc
gagtacctcgcgcgctgcggcctcgacggcgccactgaccgcgactccttccgtgccaag
gtgcccgtcgtcacctacgaggacctgcagcccgacatccagcgcatcgccaacggcgac
cgatccgccatcctctccgcacaccccatctctgagttcctcacaagctctgggacttcg
gctggtgaacggaagctgatgccgaccatcaaggaggagctcaacaggcggcagctgctc
tacagtctcctcatgccggtcatgaacctgtacgttccgggtctggacaaggggaagggc
ctctacttcctgttcgtcaagtcggagacgacgacgccgggcgggctcacggcgcggccc
gtcctgacaagctactacaagagcgaccagttcaagaaccgcccgtacgacccctaccac
gtctacaccagcccaacgcccgccatcctctgcgccgacgcgttccagagcatgtacgtg
cagatggcgtgcggcctgtgccagcgccacgacgtgctccgcgtcggcgccgtcttcgcc
tcgggcctcctccgcgccatccgcttcctccagctccactgggagcagctcgcggccgac
atcgaggcgggatccctcaccccgcgcgtcaccgacccggccatccgcgaggctgtcgcc
ggcatcctccgccccgacgccgagctggccagcttcgtgcgcgccgagtgctccaggggg
gactggggcggcatcatcacccgcgtctggcccaacaccaggtacctggacgtcatcgtc
accggcgccatgcagcagtacatccccacgctcgagtactacagcggcggcctgcccatg
gcctgcaccatgtacgcctcctccgagtgctacttcggcctcaacctccgccccatgtgc
cacccgtcggaggtctcctacaccatcatgcccaacatgggctacttcgagttcctcccc
atcgacgaggccagcggcgacgtggcgtcgggcgacgccgcgcacctcgtggacctggcc
aaggtggaggccggccgcgagtacgagctggtcatcaccacctacgcggggctcaaccgc
taccgcgtcggcgacatcctgcgcgtcaccggcttccacaacgcggcgccgcagttccgc
ttcgtgcgccgcaagaacgtgctgctctccatcgagtccgacaagaccgacgaggcggag
ctccagcgcgccgtggagcgcgcgtccgcgctgctccgcccgcacggcgcctccgtggtg
gagtacaccagccacgcgtccaccaagagcatcccgggccactacgtcatctactgggag
ctcctcaccaagtgcggcggcgacagcgccatcgccggcaacgtgctggacaggtgctgc
ctggagatggaggaggcgctcaacacggtgtaccggcagagcagggtcgccgacggctcc
atcgggccgctggagatccgggtggtccgcggcggcacgttcgaggagctcatggactac
gccatctcccgcggcgcctccatcaaccagtacaaggtgcctcgctgcgtctccttcccg
cccatcgtcgagctgctcgactcacgggtcgtgtcggcacacttcagccccgccctgccg
cactgggcacccgcccggcgctcagactaa
DBGET
integrated database retrieval system
