Lolium rigidum (rigid ryegrass): 124700193
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Entry
124700193 CDS
T09103
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124700193
03015 mRNA surveillance pathway
124700193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124700193
03041 Spliceosome [BR:
lrd03041
]
124700193
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124700193
Spliceosome [BR:
lrd03041
]
Complex C
Other components
EJC/TREX
124700193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
DUF5520
DUF1376
Motif
Other DBs
NCBI-GeneID:
124700193
NCBI-ProteinID:
XP_047088315
LinkDB
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Position
3:complement(344057985..344062202)
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AA seq
402 aa
AA seq
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MAAASEKTAEDIRRELQELQRQHREISERLRDPRGLRRGAPPTGPGGPRPLRGFQRPAPE
PVDQPEPKRRLLSAVVKVDSAEAKEDDANSAAAAEGRENGGSVAAEGAERRGAGNGGFRR
DGTQWISRRELDKALPEPLPRQFPKDDDQSLVRRNRRMLGKLLVGTLEKFQQEDKKLSNS
EAFMRRSEAQQKADQKAREDSERLRQQEREQAAEKRRRDMTLRARVAAKAEEKRLELLYL
QWTEHHKKLSNFLRTKAEPAIYYMPTKPLSDDPAIVEQTKEKTFEEWKSVRRAELNQFQK
QVEEHYMSNVEKQLERIQNARNARKGNVPANMQEMDKELDTHRAEHGPKARRIPDGDNDE
DEDVDDMAVEDYLMDEVLGVSEDPTKPSEETTDVAPVPDEAQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgtcggagaagacggccgaggacatccgccgcgagctccaagagctccag
cgccagcaccgcgagatcagcgagcgcctgcgcgacccccgcggcctgcgacgcggcgct
ccccccaccggccccggcggcccccgcccgctccgcggcttccagagacccgctccggaa
ccagtggaccagcctgagccgaagcgccgccttctatctgccgtggttaaagtggacagc
gctgaagctaaggaggacgatgcgaacagtgcagcggcggcggaggggcgagagaatgga
ggttcggttgctgctgaaggtgctgagaggaggggagccggtaatggtgggttcaggagg
gatgggacccagtggatttcaaggagggagcttgataaggcgctgccggagcctctcccc
aggcagtttcccaaggatgacgaccagagcttggtcaggaggaacaggagaatgctaggg
aagctccttgttggcacgctagagaaatttcagcaagaggacaaaaaattgtccaactca
gaggcttttatgcgtcgatcagaggctcagcagaaggctgatcaaaaggcccgcgaggac
agcgaaagattgcgacagcaagagcgggagcaagcagcagagaagcgtaggcgcgatatg
acacttcgtgctcgagtagctgctaaggcagaagagaagaggttggagctgttgtaccta
cagtggactgagcatcacaaaaagctgtccaatttcttaaggacaaaagctgaaccagct
atttattacatgccaaccaaaccactaagtgatgatccagctattgttgagcagaccaag
gaaaagacattcgaagaatggaagtctgtacgtagggctgagctgaaccagtttcagaag
caagttgaggagcactatatgtctaacgtcgagaagcagttggaaagaattcagaatgcc
cggaatgctcggaaggggaacgtccctgctaacatgcaggaaatggataaggagctggac
acacacagggcagagcatggtccaaaggctcggcggatccctgacggtgacaacgatgag
gatgaagatgtggacgacatggccgtggaagattacctgatggatgaagtccttggcgtc
agcgaggacccaaccaagccgtctgaagagactactgatgttgctcctgtacctgacgaa
gcacagtag
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integrated database retrieval system