KEGG   Lolium rigidum (rigid ryegrass): 124700193
Entry
124700193         CDS       T09103                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03013  Nucleocytoplasmic transport
lrd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124700193
   03015 mRNA surveillance pathway
    124700193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrd03019]
    124700193
   03041 Spliceosome [BR:lrd03041]
    124700193
Messenger RNA biogenesis [BR:lrd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     124700193
Spliceosome [BR:lrd03041]
 Complex C
  Other components
   EJC/TREX
    124700193
SSDB
Motif
Pfam: Pinin_SDK_memA DUF5520 DUF1376
Other DBs
NCBI-GeneID: 124700193
NCBI-ProteinID: XP_047088315
LinkDB
Position
3:complement(344057985..344062202)
AA seq 402 aa
MAAASEKTAEDIRRELQELQRQHREISERLRDPRGLRRGAPPTGPGGPRPLRGFQRPAPE
PVDQPEPKRRLLSAVVKVDSAEAKEDDANSAAAAEGRENGGSVAAEGAERRGAGNGGFRR
DGTQWISRRELDKALPEPLPRQFPKDDDQSLVRRNRRMLGKLLVGTLEKFQQEDKKLSNS
EAFMRRSEAQQKADQKAREDSERLRQQEREQAAEKRRRDMTLRARVAAKAEEKRLELLYL
QWTEHHKKLSNFLRTKAEPAIYYMPTKPLSDDPAIVEQTKEKTFEEWKSVRRAELNQFQK
QVEEHYMSNVEKQLERIQNARNARKGNVPANMQEMDKELDTHRAEHGPKARRIPDGDNDE
DEDVDDMAVEDYLMDEVLGVSEDPTKPSEETTDVAPVPDEAQ
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggccgccgcgtcggagaagacggccgaggacatccgccgcgagctccaagagctccag
cgccagcaccgcgagatcagcgagcgcctgcgcgacccccgcggcctgcgacgcggcgct
ccccccaccggccccggcggcccccgcccgctccgcggcttccagagacccgctccggaa
ccagtggaccagcctgagccgaagcgccgccttctatctgccgtggttaaagtggacagc
gctgaagctaaggaggacgatgcgaacagtgcagcggcggcggaggggcgagagaatgga
ggttcggttgctgctgaaggtgctgagaggaggggagccggtaatggtgggttcaggagg
gatgggacccagtggatttcaaggagggagcttgataaggcgctgccggagcctctcccc
aggcagtttcccaaggatgacgaccagagcttggtcaggaggaacaggagaatgctaggg
aagctccttgttggcacgctagagaaatttcagcaagaggacaaaaaattgtccaactca
gaggcttttatgcgtcgatcagaggctcagcagaaggctgatcaaaaggcccgcgaggac
agcgaaagattgcgacagcaagagcgggagcaagcagcagagaagcgtaggcgcgatatg
acacttcgtgctcgagtagctgctaaggcagaagagaagaggttggagctgttgtaccta
cagtggactgagcatcacaaaaagctgtccaatttcttaaggacaaaagctgaaccagct
atttattacatgccaaccaaaccactaagtgatgatccagctattgttgagcagaccaag
gaaaagacattcgaagaatggaagtctgtacgtagggctgagctgaaccagtttcagaag
caagttgaggagcactatatgtctaacgtcgagaagcagttggaaagaattcagaatgcc
cggaatgctcggaaggggaacgtccctgctaacatgcaggaaatggataaggagctggac
acacacagggcagagcatggtccaaaggctcggcggatccctgacggtgacaacgatgag
gatgaagatgtggacgacatggccgtggaagattacctgatggatgaagtccttggcgtc
agcgaggacccaaccaagccgtctgaagagactactgatgttgctcctgtacctgacgaa
gcacagtag

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