Lolium rigidum (rigid ryegrass): 124700514
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Entry
124700514 CDS
T09103
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
124700514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124700514
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
124700514
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
DUF3810
PhoU
Motif
Other DBs
NCBI-GeneID:
124700514
NCBI-ProteinID:
XP_047088588
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Position
3:369585463..369588321
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AA seq
290 aa
AA seq
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MATPAAAPRHSCAKLSVAVEDPKAPGGGGIFVKATWLPTRFSLAVTDGAGAWVADASDAE
VRLRAEQWDQPVAEYLALAERYLAFHQPASTYSFHEAGNGNRRLSWTFEKQGTKLEWRWK
LQQSPHTQQTIAEVLDFLMDANIRLSEEVVRKTQSFDKLKQEAEKCLQQSERFNNEKADF
EQASFTKFVAVLNSKKVKLRLLKDKIAAHEAADKAPKEDEDNESSDKGPGEEDEGNSTDR
TEPFEGDSDKDLSVKGEPSETGSGNRHSSPEKSATTSTSRGRRGRKRTRK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccccgcggcggcgccgaggcacagctgcgcgaagctctcggtggcggtcgag
gaccccaaggcgccgggcggcggcggcatattcgtgaaggccacgtggctccccacccgc
ttctcgctcgccgtcaccgacggcgccggcgcctgggtcgccgacgcctccgacgccgag
gtgcgcctccgggccgagcagtgggaccagcccgtcgccgagtacctcgcgctcgccgag
cgctacctcgccttccaccagcccgcctccacctactccttccacgaggccggcaacggc
aatcgcaggttgtcatggacatttgaaaaacaaggtaccaaattggaatggcgttggaaa
ctgcagcagtcaccccacacacagcagactatagctgaggttttggattttctaatggat
gcaaatatacgcttgagtgaagaggttgtcaggaagacacaatcatttgacaagctgaaa
caagaagctgagaagtgcttgcaacaaagtgaaagatttaacaacgagaaagccgatttt
gagcaagcttcctttacaaagtttgtggctgtgctgaactcgaagaaggtcaagctcaga
ctgctcaaggacaaaattgctgcacatgaagcagcagacaaggcgccgaaggaggacgag
gataacgaatcttcagacaaagggccgggggaggaggacgagggtaactcaactgacagg
acggagccgttcgagggagatagcgacaaggacctgagcgtcaagggtgagccctcggag
acgggcagcggcaatcgccacagctccccggagaaatctgccaccacctccacctcgaga
ggcaggaggggtcgcaagaggacgaggaaatga
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