Lolium rigidum (rigid ryegrass): 124700562
Help
Entry
124700562 CDS
T09103
Name
(RefSeq) RNA-binding protein 208
KO
K13201
nucleolysin TIA-1/TIAR
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124700562
03041 Spliceosome [BR:
lrd03041
]
124700562
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124700562
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124700562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
124700562
NCBI-ProteinID:
XP_047088645
LinkDB
All DBs
Position
1:98957889..98962987
Genome browser
AA seq
448 aa
AA seq
DB search
MNGAGGSQQQQQQQRLRQQQQQQQQQQALLMQQALQQQQYQSGVLAAAAAAAMTQMEPVS
NGNLPPGFDPSTCRSVYVGNVHPNVSESLLIEVFQSTGPVERCKLIRKEKSSFGFVDYYD
RRSAAISIMTLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFS
TYSSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNA
EEKQEADNHNTVVLTNGSSSNAAMESNQDTGSKENPENNPDFTTVYVGNIGHEVNRDELH
RQFYNLGVGAIEEVRVQQEKGFGFVRYSTHGEAALAIQMANGLVVRGKPLKCSWGNKPTP
PGTSSKPLPPPVASYQPVAMAGVPQGFSTAELLAYQRQLALSQAAAGQLAGQHGLAGQVS
AGLLAAGSQALYDGYPNQSSAQQLMYYN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgccggcgggagccagcagcaacagcagcaacagaggctcaggcagcagcag
caacagcagcagcagcagcaggccctcctgatgcagcaggcgctgcagcagcagcagtat
cagtccggcgtcctcgccgccgccgccgcggcggccatgactcagatggagcctgtttcg
aatggcaatctcccacctgggtttgatccatccacatgccgcagtgtgtatgtgggaaac
gtacaccctaatgtcagtgaaagccttctgattgaagtattccagagcactggtccagtg
gaaagatgcaagctcattcggaaagaaaagtcttcttttgggtttgttgattactatgat
cggagatcagcagctatttcaatcatgacccttcatgggcgtcacatatacggtcaagca
atcaaggtgaactgggcgtacgcaagtacacagagagaggatacgtctgggcatttccat
atttttgttggtgatttaagttctgaagtgaatgatgcaacactttatgcctgtttctca
acatattcttcttgttctgatgctcgagtcatgtgggacaataaaactggacgctccaga
ggttatggctttgtctccttccgcaatcaacaggaagctgaaactgctataactgaaatg
actggtaaatggcttggcagcagacaaattaggtgcaactgggcaaccaagactaatgca
gaagagaaacaggaagctgacaatcataacacagttgtactaacaaatggtagttcgagt
aatgcagcaatggagtcgaaccaggatacgggaagtaaagagaatccagagaacaatcct
gatttcactacggtgtatgttggcaacattggacatgaggttaatcgggatgagcttcac
cgtcagttctacaacttaggggttggggctattgaggaagttcgtgttcaacaggaaaaa
gggtttggatttgtaaggtacagtacccacggcgaagcagcattggctattcagatggcc
aatggattggttgttcgtggcaagccactaaagtgctcgtggggcaataagccaactccg
cccgggacatcttccaagccactgccaccgccagtcgcttcttatcagcccgtagcaatg
gccggtgtgccacaaggcttctcaacagctgaacttctggcttaccagaggcagctcgcc
ttaagccaggccgcggctgggcagctcgccggacagcacggtctcgctggtcaggtatcc
gcgggtctccttgctgctggttcccaggctctctacgatggctacccgaaccagtcatcg
gcgcagcagctgatgtactacaactag
DBGET
integrated database retrieval system
