Lolium rigidum (rigid ryegrass): 124700790
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Entry
124700790 CDS
T09103
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03030
DNA replication
lrd03410
Base excision repair
lrd03420
Nucleotide excision repair
lrd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124700790
03410 Base excision repair
124700790
03420 Nucleotide excision repair
124700790
03430 Mismatch repair
124700790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124700790
03036 Chromosome and associated proteins [BR:
lrd03036
]
124700790
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124700790
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124700790
DNA Replication Termination Factors
ELG1-RFC complex
124700790
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124700790
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124700790
Check point factors
HRAD17(Rad24)-RFC complex
124700790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
RuvB_N
Rad17
DUF815
Sigma54_activ_2
Mg_chelatase
AAA_22
AAA_5
AAA_11
AAA_16
nSTAND3
ABC_tran
AAA_2
NPHP3_N
AAA_29
AAA_24
FtsK_SpoIIIE
DUF5906
ATPase_2
RNA_helicase
TsaE
Motif
Other DBs
NCBI-GeneID:
124700790
NCBI-ProteinID:
XP_047088817
LinkDB
All DBs
Position
3:complement(391238173..391242915)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKHRPKTLDKVIVHEQVAQNLKKFVAEQDCPHLLFYGPPGSGKKTLIMALIKQMFG
AGAEKVKMENKTWKIDTGTRTFDLELAMLSSSHHVEMNPSDAGFQDRYVVQEVIKEMAKS
RPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR
CLNVRVNAPSEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQY
PFSPNQVPPPLDWEQYVSEIATDILSEQSPKRLYSVRQKFYELLVNCIPPESILKKLLTE
LMKKLDADLKHEVCRWAAHYEHKMRLGSKAIFHLEAFVAKFMSIYKEFLVATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggtggacaagcaccggccgaaaaccctagacaaggtcatcgtccatgagcag
gtggcgcagaacctcaagaagttcgtggcggagcaggactgcccgcacctgctcttctac
gggccgccggggtccggcaagaaaaccctaatcatggcgctcatcaagcagatgttcggc
gccggtgccgagaaggtgaagatggagaacaagacctggaagatagatactgggacgagg
acatttgatctggagctggcgatgttgtcgagctcccaccacgtagaaatgaaccctagc
gatgcggggtttcaggacagatatgttgttcaggaggtcataaaagagatggccaagagc
aggccaattgatgcaaagggcaagagagcattcaaagtgcttgtcctaaatgaagttgat
aagctctcacgagaagcacagcattctctccgtaggacaatggagaagtacagtgcatct
tgtaggctgatattatgctgtaatagctcctcaaaggtgacagaagctgtaagatcccgt
tgcctgaatgtgcgagtgaatgcacctagtgaagatcagattgtacaagttctggagttc
attgggaagaaagaaaacctgcaacttccatttggatttgctgctcggatagcagctcag
tcaaaccgcaacttgaggcgagcaatattattttttgagacatgcaaagtccaacaatat
ccgttttcaccgaatcaagtgccacctcctcttgactgggagcagtatgtgtctgaaatt
gcgactgatatcttgagtgaacaaagccctaaaaggctatactctgtgcgccagaaattc
tacgagttacttgtaaattgtatcccacctgaaagcattttgaagaagttgttgactgag
ttaatgaagaagttagatgcagatctgaaacatgaagtttgtcgctgggctgcgcattat
gaacacaagatgcgccttgggtccaaggccatttttcatctggaagctttcgtggccaag
ttcatgagtatttacaaggagttcttggtcgccacatttggttga
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integrated database retrieval system
