Lolium rigidum (rigid ryegrass): 124700953
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Entry
124700953 CDS
T09103
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Module
lrd_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124700953
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
124700953
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
124700953
NCBI-ProteinID:
XP_047088977
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Position
3:complement(402840614..402841852)
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AA seq
412 aa
AA seq
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MASATTAKLLWSPLIALLLLSVCDASSVKEPEGTSVVFSIENYGARGDGKHDDTQALAKA
WSAACSSSRPAALLVPKGKSYLLKSTTLSGPCKSTVVFMVKGTLVAPPSRSDWSDDNISH
WIMFQGISGLTVTGGGVINGNGEVWWKNSCKTNEALPCTQAPTGLTFHLCDNLKVDYLKI
VNSQQIHMSVEDCTDVQLTRLSITAPGTSPNTDGIHITRSKDVQVRDCIIKTGDDCMSIE
DGTHNLHVTKVVCGPGHGISIGSLGDDNSRAEVSGITIDSVQLYGTTNGARIKTWQGGSG
FAKDIIFQNIIMDNVQNPIIIDQNYCDSAKPCKDQESAVEISNIIFKNIRGTTTSNDAIK
LSCNKNSPCSDISLENIELKLEGGKGDTESTCQNAKWRKSGNVVPSPCKGNN
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcaacgactgctaagctcttgtggtctcccctgatcgctctgctcttgctg
tccgtctgcgatgctagttcagtgaaagagcctgagggcacctccgttgtgttcagcatc
gaaaactatggggcacggggcgatgggaagcatgacgacacgcaggccctggccaaggcg
tggagcgcggcgtgctcctcttcccggccggccgccctgctcgttccaaagggcaagagc
tacttgctcaagtccaccactctttctggcccatgcaagtccaccgtcgtcttcatggta
aaaggcacgctggtggcccctccgagccggtctgactggagtgacgacaacatcagccac
tggatcatgttccaaggaatctccggtctcacagtcaccggcggtggtgttatcaacggc
aacggcgaggtttggtggaagaactcatgcaagaccaacgaagctctaccgtgcacacag
gctccgactggtttgacgtttcacctatgcgataatctgaaggtggactacctgaaaatt
gtcaatagccaacagatccacatgtcggtagaggattgcaccgatgtgcaattaacccgc
ctatctatcacggcacccggcacgagcccgaacaccgatggcatccacatcacacgctcc
aaagatgtgcaagttagagactgcatcatcaagactggagatgactgcatgtcgattgag
gatggaactcacaatcttcatgttactaaagtcgtgtgtggtcccggacatggcatcagc
attggcagcttgggagacgacaactccagagccgaggtttctggtattacaattgactcg
gtacagttatatggcacaactaacggtgcccgaatcaagacatggcagggtggaagtggg
ttcgcgaaggatatcatatttcagaacattatcatggacaacgtgcaaaacccaattatt
attgaccagaactactgcgactctgctaagccatgcaaggatcaagaatcggcagtggag
atcagcaacatcatcttcaagaacattagagggactaccacttccaacgatgccatcaag
ttgagttgcaacaaaaattccccgtgctccgatatttccctggagaacatcgagttgaaa
ttagagggtggcaagggcgacaccgaaagcacatgccagaatgcaaaatggagaaaatct
ggaaatgttgtgccatcgccttgcaaaggcaacaactag
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