Lolium rigidum (rigid ryegrass): 124701153
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Entry
124701153 CDS
T09103
Name
(RefSeq) coatomer subunit alpha-3-like
KO
K05236
coatomer subunit alpha
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124701153
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124701153
Membrane trafficking [BR:
lrd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
124701153
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124701153
Exosomal proteins of bladder cancer cells
124701153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
TPR_COPA_B
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_ACSF4
Fis1_TPR_C
ThaI
ENTH
Motif
Other DBs
NCBI-GeneID:
124701153
NCBI-ProteinID:
XP_047089158
LinkDB
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Position
3:complement(9338236..9343127)
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AA seq
1220 aa
AA seq
DB search
MLTKFETKSNRVKGLAFHPRRPWILASLHSGVVQMWDYRMGTLLDRFDEHDGPVRGVHFH
KTQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHDEHPWIVSASDDQTIRVW
NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKSSSPADDIMR
LTQMNTDLFGGIDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWVLAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDTVFYVKDRFLRFYEYSAQKEVQVAPIRRPG
SVTLNQSPRSLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVF
IARNRFAVLEKSSNQVLVKSLKNEIVKKSPLPIATDAIYYAGTGNILCKAEDRVAIFDLQ
QRLVLGELQASAVKYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDEN
GVFIYSTLNHIKYCLPNGDNGIIKTLDVPIYITKVAGNIICCLDRDGKNKMITVDASEYI
FKLALLKKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI
QIAVASAKEIDDKDHWYKLGIEALRQGNVGIVEYAYQRTKNFDRLAFLYLITGYLDKVGF
MSKIAGQNNNLMGQFHNALYLGDARKRVEILENAGQLPLAYVTAATHGLPEIADRLAGEL
GENVPSLPEGKTSSLLIPPAPLTACSDWPLLRVMRGIFDGGLDATGRQEQEEDYEDAGAG
GDWGDEDLEIVDVSNVMENGDAAHVEGSETNEEDGEEEGGWDLEDLELPPEADTPKATGP
ARSALFVAPTPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIRNFAPLKALFLD
AHMGSHTYLRAFASAPVIPVAVEKGWSESASPNVRGPPALVFSFSQMDDKLKAAYKATTE
GKFPEALRQFLNILYTIPLLVVDSRREVDEVKELIEIVREYVLGLRMEVKRKELKNDATR
QQELAAYFTNCKLQKVHMRLVLTSAMGLCFKGGNYATAANFARMLLENSPNEAQAKKARQ
VLQACGDRKDGHQLNYDFRNPFVVCGATFIPIYRGQKDVSCPYCTSRFVPSIEGQLCTIC
ELSVVGADASGLLCSPTQSR
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagaccaagagcaaccgcgtcaagggcctcgccttccacccgcgc
aggccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatg
ggcacactcctcgaccgattcgacgagcacgacggcccagtgcgcggcgtacacttccac
aagacacagccgctattcgtatcaggaggtgatgattacaagatcaaggtgtggaactac
aagacgcaccgctgcctcttcaccctccatggccacctcgactacatccgcacagtccag
ttccatgacgagcatccatggatcgtcagcgccagcgatgaccagacaatccgtgtatgg
aactggcagtcacgtacctgcgtggccgtgttgacagggcataatcactatgtcatgtgc
gcttccttccatcccaaggaggacctcgtcgtctctgcgtctctcgatcagaccgtccgg
gtttgggatatcggggcgctcaggaagaagtcttcgtccccggccgatgacatcatgcgt
ctcactcagatgaacactgatctctttggaggcattgatgctgttgtcaagtatgtcttg
gagggtcatgaccgtggggtcaactgggcctcctttcatcccaccctgccacttattgtt
tctggggcagatgaccggcaagtcaaactgtggagaatgaacgataccaaggcatgggaa
gttgatactctgagaggtcacatgaataatgtgtcatgtgtactgttccacgcgaagcag
gacatcatcgtatccaactcagaagacaaaagcatccgtgtttgggatgccacaaagaga
actggtatccagacgtttaggcgggagcatgaccgcttctgggtccttgctgctcaccct
gaaatgaatcttcttgcagctggtcatgatagtggcatgattgtgttcaagctagagagg
gaacgtccagctttctctgtcagtggtgataccgtgttctatgtgaaggaccggttcctt
cgtttttacgagtactcagcacagaaggaggtccaggtggctccgataagaaggcctgga
tcagtcaccttgaatcagtcaccaaggtcattatcatatagcccaactgagaatgctgtc
ttgatctgctctgatgttgatgggggctcatatgagctttacattgttcccaaagattct
gctggcagggctgattatttgcaggacgcaaagaagggagctggtggttctgcagttttc
atagctcggaaccggtttgctgtcctggagaagagcagcaaccaggttttggtgaagagt
cttaagaatgagattgtgaagaaaagtcctcttcctattgcaactgatgctatttactat
gctggaactggtaacatattgtgcaaagctgaagacagggtggccatctttgatctgcag
cagcggcttgttcttggtgaactccaggcatctgctgttaagtatgtggtttggtcgagt
gatatggagtcagttgcactgctcagcaagcatgctgtagtcattgcaaacaagaagctt
gtccatcgctgcacacttcacgaaaccatacgtgtaaagagtggtgcctgggatgaaaat
ggcgtgttcatatattccactttgaaccatatcaagtactgccttcctaatggtgacaat
ggcatcattaaaacacttgatgttcctatttacataaccaaggttgcagggaacatcatt
tgctgtcttgatcgtgatggaaagaacaagatgataacagttgatgcgtctgaatacatt
ttcaagctggcccttctaaagaaacgctacgatcatgttatgagtatgatcaagaactcg
cagctttgtggacaggcggtcatttcttatttacagcaaaaaggatttccagaagttgct
ctccactttgtgaaagatgagaagaccagatttaacctggccctcgaaagtgggaacatc
caaattgctgtcgcttcagcaaaggagattgatgacaaggatcactggtacaaattggga
attgaggctctgaggcagggaaatgttggtattgttgaatatgcataccagaggacaaag
aattttgaccggcttgcttttctgtatctgataactggttacttggacaaggtgggcttt
atgtccaagatagctgggcaaaataacaatttgatgggccagttccacaatgcgctgtat
cttggggatgctaggaaaagagtcgagatcttggagaatgcgggacagctacctcttgca
tatgtaactgctgccactcatggacttcctgaaatcgctgataggcttgctggtgaattg
ggagaaaatgtgccctctctacctgaagggaaaactagttcacttttaattcctcctgca
cctctcacggcgtgtagtgattggccattgttgagggtgatgcgtggtatttttgatggt
ggactagatgctactgggaggcaagagcaggaggaagactatgaagatgctggtgctggt
ggtgattggggagatgaagacctagaaattgttgacgtaagcaatgtgatggaaaatgga
gatgctgcccacgtcgagggaagtgaaaccaatgaggaggatggagaagaggaaggtggt
tgggaccttgaagatttggagttgccacctgaggcagatacaccaaaagctactggtcct
gcccgctccgctttgtttgtggctcccacaccaggcatgcctgtcagccaaatttggact
cagaagtcatctcttgctggtgagcatgctgcagctgggaattttgacactgcaatgcgg
ctgcttagccgccagttgggcatcaggaactttgctcccttgaaggccttgtttcttgat
gcacatatgggcagtcatacatatctgcgtgcatttgcaagcgctccagtgatacctgtt
gctgttgagaaaggctggagtgaatctgctagtcccaatgtgaggggcccacctgcactt
gtgtttagcttctcacagatggacgacaagctcaaggctgcatataaggccacaaccgag
ggtaaattcccagaagcgctgaggcagttcctcaacatcctgtacaccatcccactcctc
gtcgtggactctcggagagaagttgatgaagtgaaggagctaatcgagatagtgagagaa
tacgttcttggcctcaggatggaagtcaaaaggaaggagctgaaaaacgacgccacccgg
caacaggagctggccgcatacttcaccaactgcaagctacaaaaggtccacatgcgtctg
gtcctcaccagcgccatgggtctgtgcttcaagggcgggaactatgccaccgcggcgaac
ttcgcccgcatgctcctggagaacagccccaacgaggcccaggcgaagaaggcccgccag
gtgctgcaggcctgtggcgacaggaaagatggccaccagctgaactatgacttcaggaac
ccgtttgtcgtttgcggggcgaccttcatcccgatctaccgcgggcagaaggatgtctcc
tgcccgtactgcacgtcccggtttgttccctccattgagggccagctctgcaccatatgt
gagctctcggtggtcggagcggacgcctcaggcctgctctgctctcctacacaatcgaga
taa
DBGET
integrated database retrieval system
