Lolium rigidum (rigid ryegrass): 124701168
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Entry
124701168 CDS
T09103
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124701168
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
General mRNP proteins
124701168
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
124701168
NCBI-ProteinID:
XP_047089171
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All DBs
Position
3:complement(9910445..9918940)
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AA seq
534 aa
AA seq
DB search
MDFDEYEYLEKTVEAAAAPSNGAAAAPRSEGKERSSRRRSSAGDEERDDGERRSKRSRSE
HRDRDRDLESRERHRSSRERRDRDEKEREKEKERRSRDRDRDREREKEKERERRSRSRSE
RRREDDDRERHRERDYRDRDVRRRKEDGAEPEADPERDQRTVFAFQLSLKADERDVYEFF
SRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKN
LVQSNASSSLAASGGARKLYVGNLHSNITEEQLRQVFEPFGLVELVQLPVDPLTGLCKGF
GFVQFARLEDAKSAQSLNGQLDIAGRVIKVSAVTDQGGMQASGATTGDLDDDEGGGLALN
ASSRALLMQKLDRSGVTTSLTSGMGATGVNTSVALAPASVLGAPTATPLLQTAISGLGLI
PGAALPVITQSIGTAPPSECLLLKNMFDPAVETDPDFDLDIKDDVREECSKYGQVRHIFV
DKNTAGFVYLRFDSIPAAMGAQKALQGRWFAGKMISATYMSTEQYEAKFPELTG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgagtacctggagaagaccgtcgaggcggccgcggctccctcc
aacggcgccgccgccgccccgagatccgagggcaaggagcgcagctcccgccgccggagc
agcgccggcgacgaggagcgcgacgacggcgagcgcaggtccaagcgctctcgctccgaa
caccgcgatagggaccgggacctcgagagccgcgagcgccaccgcagcagccgggagcgc
cgggaccgtgacgagaaggagagggaaaaggagaaggagaggaggagccgcgaccgtgac
cgtgaccgcgaacgggagaaggagaaggagagggagcgcaggagccgcagcaggtcggag
cgccgccgtgaagacgacgaccgcgagcgccaccgcgagcgcgactaccgtgaccgcgat
gtcagacgtagaaaagaagatggtgccgaacctgaagcagatccagaaagagatcaaagg
actgtatttgctttccagctatctttgaaggcggatgaaagagatgtgtatgagttcttt
tcaagggctgggaaggtccgggatgtccgcctcatcatggaccgaaactcacgacgttca
aaaggagttgggtacattgaattctatgatgttatgtctgttccaatggccattgctctc
tctggtcagctgcttcttggtcaacaggtgatggttaagccatcagaggctgaaaagaat
ttagttcagtcaaatgctagttcaagtttagcagcttcaggtggagcaaggaagttgtat
gttggaaatcttcattccaatattacggaagaacaattgagacaggtcttcgaaccattt
ggactggttgagcttgtccagctgcctgtggatccacttactggactgtgcaaaggtttt
ggttttgttcagttcgcccgtcttgaagatgccaaatctgctcagagtttaaatggtcaa
ctcgatattgctggaagggtaatcaaggtttcagctgtgacggaccaagggggaatgcaa
gctagtggggcaacgacgggagatttggacgatgatgaaggtggaggcttggcactgaat
gctagctcgagagctcttcttatgcagaaactggaccgcagtggcgttacaaccagtttg
acttctgggatgggtgctactggtgtgaacacttcggtggcattagcacctgcatccgtt
cttggtgcacctacagccactcctttgctgcaaacagcaatatctggtctcggtctaatt
ccaggggcagctcttccggttatcacccaatccattggcacggctccaccgagtgaatgc
ctactgctcaagaatatgtttgatccagctgtggagacggatcctgattttgatttggat
attaaagatgatgttcgagaagaatgttctaagtatggtcaagtaaggcacatttttgtg
gacaaaaatactgcgggctttgtgtacctgcggttcgatagcataccagctgctatgggt
gcacagaaagcactccaggggagatggtttgcgggaaagatgatcagtgcaacctatatg
tctactgagcagtacgaagcgaagttcccggagctaactgggtag
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