Lolium rigidum (rigid ryegrass): 124701216
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Entry
124701216 CDS
T09103
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4
KO
K11644
paired amphipathic helix protein Sin3a
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124701216
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
124701216
REST complex
124701216
Heterochromatin formation proteins
Other heterochromatin formation proteins
124701216
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
HHD_RTEL1
PAH_ZNF598
TPPII_C
Suv3_N
Motif
Other DBs
NCBI-GeneID:
124701216
NCBI-ProteinID:
XP_047089249
LinkDB
All DBs
Position
1:complement(99202545..99212490)
Genome browser
AA seq
1318 aa
AA seq
DB search
MAPPSPTSAQKLTANDALAYLKAVKEQFKDDRAKYDEFLEVMRDFKSTRIDTAGVIIRVK
TLFNGYPELILGFNTFLPKGYEIKLQDLDTDKKPVDFTEAIGFVNKIKARFQHEEDVYKA
FLGVLNMYRMHNKPIQDVYEEVATLFRDHPDLLEEFKHFLPDTSTVPQVLAVPKGVSVKQ
DGDKTKRSVPSIKRERPHPSTAENDTTVDRPDLKHETGRKRIDKEKGRKTDRDRRDQEKD
GEYDRKDLDGEQPKRKTFPKKLEAETHQGAASNAALSYNDNDAQKGLYTQEFHFCEKVKE
KLQPEAYQEFLKCLHIYSQDIITRSELKILVNDILQRCPDLMNGFSEFLEHCENIDDFLD
GLINKRQTSRTVKTWEKERDKGRAGEDMERDNEKPSENGRERLEKVSKDGTTHKATAFSG
KEKHLCKPISELDLSNCQRCTPSYRLLPKNYPMPSSSSRTDIGVSVLNDLWVSVTSGSED
YSFKHMRKNQYEESLFRCEDDRFEMDMLLESVKATIKRVEEFIEKLQDNSIEPDSPIHID
EHLTTLNLRCIERLYGDHGVDVIDVLRKNASVALPVILTRLKQKQDEWSRCRSDFNKVWA
EVYAKNHHKSLDHRSFYFKQQDSKNLVTKALLSEIKEINEKKRKEDNVLLAIAAGNRRPI
VTNMSFEYVDSEIHEDVYQIIKYSCGEVCGSADQVDKVMRTWTTFVEPFLGVQPRARCVE
DAGVVKHKSRTPTAGLASVGGNNNATANGAVAVKLADRDESIPKEQAQSSCAILANGVAE
DARNGFHDADQTVRRGEGPSGQNISTERSVESTHLSQIEQNDLTTNLEITSGTSTSRGNF
SGGEAVTEAMGGNETIPSIGRGETGSRKNSKVEREEGEVSPYGDVEDENFGPPGNVAADG
ASRPKEASAGRPKAAEFAGENDADVDDGGEESAQRCTEDSENISEAGEDASGSESSDDEE
RSREDHEDADHGDPDVKAESEGEADGNTEAHDADGGISLPFSERLQNAVKPLAKHVPTVL
HDRGEKFSRIFYGDDSFYVLFRLHQILYERILSAKTNSCTTEKKWRTSKNANSPHQYSKF
MAALYNLLDGSSDNTKFEDDCRSIIGTQSYVLFTLDKLIYKVVKQLQAIASDEMDNKLLQ
LYIYENSRSPGRFFDLVYHENARVLLHDESNYRFERHSNPTRLSIQLMEYGHEKPEATAV
SIDPKFSSYLYDNYLSSISHTKLSDDVFLERNKRKHGSSDDPQASLEVMDDFRVTNGLEN
KISCKSSKASYVLDTEDVLFRVRRRRVSSSRTTPEKAGIVKEADALKAQRFHKFLSRP
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggctccgccgtcgccgacgtcggcgcagaagctcaccgccaacgacgccctcgcctac
ctcaaggccgtcaaggagcagttcaaggacgaccgcgccaagtacgacgagttcctcgag
gtcatgcgcgacttcaaatccacaaggatcgacaccgcgggcgtcatcatccgcgtcaag
accctcttcaacggctacccggagctcatcctcggcttcaacaccttcctgcccaagggc
tacgagatcaagctgcaggacctcgacaccgacaagaagcctgtcgacttcaccgaggcc
atcggcttcgtcaacaagatcaaggccaggttccagcacgaggaggacgtctacaaggcc
ttcctcggggtactcaacatgtaccgcatgcacaacaagcccatccaggacgtatacgag
gaggtcgcgacgctcttccgtgaccatcctgacttgctcgaggagttcaagcatttcttg
cctgatacatccaccgtgccgcaagtcttggccgttccaaagggtgtttcggttaaacag
gatggagacaagaccaagaggagtgtaccgagcattaagagggagaggcctcatccatca
actgctgaaaatgacaccactgttgatcgccctgatctcaagcatgagaccggtagaaag
cgtattgacaaggaaaagggtcgtaagaccgaccgggatagaagagatcaagagaaggat
ggtgaatatgataggaaagatttggatggagaacaacccaagcgcaaaactttcccaaag
aagctggaggctgagacacaccaaggggcagctagcaacgctgctttgtcatacaatgat
aacgatgcacagaaaggtttgtacactcaagagttccatttctgcgagaaagtgaaggag
aagctacagcctgaagcttaccaggagtttctgaaatgccttcacatatacagccaggac
ataattacaagaagtgaattgaaaattttggtaaatgacatacttcagcgctgtccagat
cttatgaatggatttagcgagttcttggaacattgtgaaaatatagatgactttctggat
ggactcatcaataaaaggcaaacatcacgaacagtgaagacatgggaaaaggagagagat
aaagggcgtgcaggggaggacatggagagagataacgaaaaaccaagcgaaaacggacga
gaacggcttgagaaagtgtctaaggatggcactacccacaaagctactgcattctctggc
aaagagaagcacttatgcaagccaatatcggagcttgacctctcaaattgtcagcggtgt
actcctagttaccgacttttgcctaaaaattaccctatgccttcttcaagttccagaact
gacattggagtctctgtgctcaatgatctctgggtatcggtgacttcaggaagtgaggat
tattcatttaaacacatgcggaagaatcagtatgaagaaagcttgtttagatgtgaagat
gacaggtttgagatggacatgctgttggaatctgttaaggcgacgataaagcgtgttgaa
gagttcatagagaagttgcaagacaattcaatcgaaccagacagccctatacatatcgat
gaacatttgactactttgaatttgaggtgcatagaacggctatatggtgaccatggcgtt
gatgtgatcgatgttcttcgcaagaatgctagcgtggctttgccagttattttaactaga
cttaagcaaaagcaggacgaatggtcaaggtgccggtcagattttaataaagtttgggct
gaagtatatgccaagaatcaccacaagtccctggaccatcgcagtttctatttcaaacaa
caagattcaaagaatctggtcacaaaagctctattgtctgagatcaaagaaattaatgag
aagaaaaggaaggaggataatgtgctacttgctattgctgctggcaataggcggccaata
gttaccaatatgtcatttgagtatgtagactcagaaattcatgaagatgtttatcagatc
atcaagtactcttgtggagaagtctgcggttcggcagatcaagtggacaaagtgatgaga
acctggacaacattcgtggaaccttttttgggagttcaaccccgtgctcgttgtgtggaa
gatgcaggtgtggtaaaacataagagccgaaccccgacagctggtcttgctagtgttggg
ggaaataataatgcaacagcaaatggtgcagttgctgttaagctagctgatcgagatgaa
agcattccaaaggaacaagcacaatcttcttgtgctatattggcgaatggagttgcagaa
gatgctcgaaatggtttccatgacgctgatcaaactgttcgcagaggtgaggggccatct
ggacaaaacatttctaccgaaagatcagtggagagtactcacctttctcagatcgaacag
aacgatcttacaacaaatttggagattacatcaggtactagtacttctagaggtaatttc
tctggaggtgaggctgtgactgaagctatgggtggcaatgagacaattccctctataggg
agaggagaaactggatctcgtaagaattcaaaggttgaaagagaagagggagaagtgtct
ccttatggggatgttgaagatgagaattttgggcctcctggaaatgtagctgcagatgga
gcttcgagaccgaaggaagcttctgctggccgacctaaagcagctgagtttgctggagag
aatgatgctgatgtggacgacggaggtgaggaaagtgcacagagatgtacagaagatagt
gaaaatatatctgaggctggtgaggatgcctctggtagcgaatctagtgatgatgaggag
cgctctcgagaagatcacgaggacgctgatcatggtgatcctgatgtgaaggctgaaagt
gagggcgaggcagacgggaacacagaggcacatgatgcagatggaggaatatcactgcca
ttttcagaacgcttacaaaatgcagttaaaccacttgccaagcatgtccccacagtttta
catgatcgcggggagaagttttcacgcatattttatggagatgattcattttatgttctt
ttcaggctacaccagatcttatatgagagaatactatcagctaagacaaactcttgtaca
actgaaaagaagtggagaacttccaagaatgcaaactcccctcatcagtattcaaagttt
atggctgcactctataacttgcttgatggttcttctgacaacaccaagttcgaggatgac
tgtcgttctatcatcgggactcagtcatatgttctttttacattagataagctgatttac
aaagttgtgaagcagcttcaagcaatagcatctgatgaaatggataataagctcctccag
ctttatatatatgaaaattcaaggtctcctggaaggttctttgatcttgtttatcatgaa
aatgctcgggttcttctccacgacgagagcaattatcgatttgaaaggcactcaaatcct
acaagattatctattcagctcatggagtatgggcatgaaaagcctgaagctactgcagtt
tcaattgatccaaaattttcttcttatctttatgataactacttatcgagtatttcacat
acgaagttatctgatgatgtcttcctcgagaggaataagcggaagcacgggagcagtgat
gaccctcaagcttccttggaggtcatggatgatttccgtgtcactaatggcctcgaaaac
aagatttcctgcaaatcctcaaaggcttcatatgtccttgacacagaagatgttttgttc
cgcgtaaggaggagacgagtttcgtctagtagaaccacacctgagaaggcaggtattgtg
aaggaagctgatgccttaaaagcgcaacggtttcataaattcctctccaggccctag
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