KEGG   Lolium rigidum (rigid ryegrass): 124701232
Entry
124701232         CDS       T09103                                 
Name
(RefSeq) cyclin-H1-1-like
  KO
K06634  cyclin H
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03022  Basal transcription factors
lrd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    124701232
  09124 Replication and repair
   03420 Nucleotide excision repair
    124701232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lrd03021]
    124701232
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124701232
Transcription machinery [BR:lrd03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     124701232
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     124701232
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B TilS_C NMT_C
Other DBs
NCBI-GeneID: 124701232
NCBI-ProteinID: XP_047089233
LinkDB
Position
3:17611083..17617602
AA seq 323 aa
MSDFQTSTHRERWIFQPQNLVDKWTGVNRRSAETLAQYGTTRLKVDPVDGSISNPEPAPD
HVVGSSGVKPLSCEEEQMMRRFYEQKIQEVCKAFKFPHKIQATAIIYFKRFYLQWSVMEH
HPKHIMLTCVYSSCKVEENHVSAEELGKGINQDHQIILNNEMIVLKSLDFDLIVFAPYRS
IEGFIDDMDDFCRAGNGAHQRLKDLYQTANSHVDRMMLTDAPLLYTPGQLALAALYKSND
ALKVLDFERYLESVFSRQRLDCPVEQFVQIMNTINYLVDRLQILTQEDMKHADRKLRHCL
DEHKKKEKKPKHKSKRTAGDARQ
NT seq 972 nt   +upstreamnt  +downstreamnt
atgtcggatttccagacctccacgcaccgtgagcggtggatcttccagcctcaaaacctg
gtagataagtggacgggggtgaaccggcgttccgcggagaccctcgcgcagtatggaacg
acgcgcttgaaggtggaccctgtcgacgggtcgatatcgaaccccgaacctgcgcccgat
cacgttgtcgggagctcgggtgtgaagcctctatcctgcgaagaggagcaaatgatgcgg
agattttacgagcagaagattcaggaagtgtgtaaagcattcaagttcccccacaagatt
caggctacagcaataatatatttcaagagattctatctacagtggtccgtaatggagcat
cacccaaagcatattatgttaacttgtgtatattcttcttgcaaagtggaagaaaatcat
gtttctgctgaggaacttggcaaaggaattaaccaggaccaccagattattttaaataac
gaaatgattgttctgaaatctttagattttgatctgatcgtttttgctccatatcgatct
atcgaagggtttattgatgacatggatgatttttgtagggcaggtaatggtgcacaccaa
cggttgaaggatttgtatcaaactgcgaattctcatgttgacagaatgatgttgaccgac
gcacctcttctctatactcctggacagttggcattggctgctctgtacaagtccaatgac
gcactcaaggtcctcgattttgaaagatacttggaaagtgttttttcaaggcaacgcctt
gattgtccagtcgaacaatttgttcagataatgaatacgattaattacttggttgaccgg
cttcaaatacttactcaagaagacatgaaacatgctgatcgcaagctgagacattgcttg
gatgagcacaagaagaaagaaaagaagccgaagcacaaatcaaaaaggactgctggcgat
gcccggcagtaa

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