Lolium rigidum (rigid ryegrass): 124701232
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Entry
124701232 CDS
T09103
Name
(RefSeq) cyclin-H1-1-like
KO
K06634
cyclin H
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
lrd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124701232
09124 Replication and repair
03420 Nucleotide excision repair
124701232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124701232
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124701232
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124701232
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124701232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
RB_B
TilS_C
NMT_C
Motif
Other DBs
NCBI-GeneID:
124701232
NCBI-ProteinID:
XP_047089233
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All DBs
Position
3:17611083..17617602
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AA seq
323 aa
AA seq
DB search
MSDFQTSTHRERWIFQPQNLVDKWTGVNRRSAETLAQYGTTRLKVDPVDGSISNPEPAPD
HVVGSSGVKPLSCEEEQMMRRFYEQKIQEVCKAFKFPHKIQATAIIYFKRFYLQWSVMEH
HPKHIMLTCVYSSCKVEENHVSAEELGKGINQDHQIILNNEMIVLKSLDFDLIVFAPYRS
IEGFIDDMDDFCRAGNGAHQRLKDLYQTANSHVDRMMLTDAPLLYTPGQLALAALYKSND
ALKVLDFERYLESVFSRQRLDCPVEQFVQIMNTINYLVDRLQILTQEDMKHADRKLRHCL
DEHKKKEKKPKHKSKRTAGDARQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttccagacctccacgcaccgtgagcggtggatcttccagcctcaaaacctg
gtagataagtggacgggggtgaaccggcgttccgcggagaccctcgcgcagtatggaacg
acgcgcttgaaggtggaccctgtcgacgggtcgatatcgaaccccgaacctgcgcccgat
cacgttgtcgggagctcgggtgtgaagcctctatcctgcgaagaggagcaaatgatgcgg
agattttacgagcagaagattcaggaagtgtgtaaagcattcaagttcccccacaagatt
caggctacagcaataatatatttcaagagattctatctacagtggtccgtaatggagcat
cacccaaagcatattatgttaacttgtgtatattcttcttgcaaagtggaagaaaatcat
gtttctgctgaggaacttggcaaaggaattaaccaggaccaccagattattttaaataac
gaaatgattgttctgaaatctttagattttgatctgatcgtttttgctccatatcgatct
atcgaagggtttattgatgacatggatgatttttgtagggcaggtaatggtgcacaccaa
cggttgaaggatttgtatcaaactgcgaattctcatgttgacagaatgatgttgaccgac
gcacctcttctctatactcctggacagttggcattggctgctctgtacaagtccaatgac
gcactcaaggtcctcgattttgaaagatacttggaaagtgttttttcaaggcaacgcctt
gattgtccagtcgaacaatttgttcagataatgaatacgattaattacttggttgaccgg
cttcaaatacttactcaagaagacatgaaacatgctgatcgcaagctgagacattgcttg
gatgagcacaagaagaaagaaaagaagccgaagcacaaatcaaaaaggactgctggcgat
gcccggcagtaa
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integrated database retrieval system