KEGG   Lolium rigidum (rigid ryegrass): 124701400
Entry
124701400         CDS       T09103                                 
Name
(RefSeq) uncharacterized protein LOC124701400
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124701400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lrd03041]
    124701400
Spliceosome [BR:lrd03041]
 Complex A
  U2 snRNP components
   U2 related factors
    124701400
 Complex B
    124701400
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11
Other DBs
NCBI-GeneID: 124701400
NCBI-ProteinID: XP_047089406
LinkDB
Position
3:complement(33122571..33129729)
AA seq 1046 aa
MSSRAQGEKGSQGATGGSETAARTRPLSIQEILRRREKKAVAEAKRAAAEAKDTKGELQD
YEKGKPSRSDSGRGHRARKDVPVEKESVRDAPREDSRKDDVRHASKEGSRKDSARHAPRE
ASKKDSLKDRPKDGSKVDDAPKKGSKKERPSARDDGQSAAKDKGSRSSHKLSASTRGRPA
ESRDGTHGEIRARNGDAARSEYLKGPAKRWNGEPVHSDRIIESDKLRNEAKRKYDHRRPE
YDQRRPDVDLPVLKKHDSARFRHYDRNDGRKEYGNPYHEEPRPKRRRSRSRDHDQGRRGR
SVSLSPKAQRRSYHGHDRDNYPPGRKYAENDRHRTSGNGGHGGESYQRHESPLGGYSPRK
RKTVPQDEQVSTKITPPAVRSPEKKPATWDQAPAGADQSNFFTTLKPIVSQTSSVSVSSS
APKPTPAIETILSGNSSSIDSVQLTQATRPLRRLHIENLTSSASEDMLIGCLNDFLLSSG
GNHIQRSKQPCLSCTINKEKRHAFVEFLTPEDATAALSFDGKSFNGSTLKIRRPKDYIEM
PHVAPKKPVEEEIKVTSDVVADSPHKIFIAGISGVLSSEMLMEIVSSFGQLAAYRFVCNE
DLGRRCAFLEYIDHSITNKACAGLNGMKLGGSIITAVQVFPNPLEVHNEASPFYGIPYSA
EALLEEPTKVLQLKNVVDREEYLLLSKPELEEILEDVRMECARFGAVKSINIVEYPSSID
SITEDIVVEPKDGPAKLEPTECCANDNCAETATDCPLPSKSIAVPSGPMKITGVDPISEG
QDHKEPDTLCESDIPAAADQYTDLDDLHAGAAGPSLDQQMEAVHMDSAQADQDATAVGDI
HARASGLSTDQPTEAVNMGFMQSDQDGTAVSDIHAGTVGPTLDQQTEADHMDSMQADQDG
TAVGDIHATAADPTLDQQTEADHMDSTQADHHATALDDDSAVGEGHAGSKTLEICISTAT
PGDVVQRSETENEQKSSNDVSESGAEKIPAAVSDTIVLEAGSILVEFMRKEAACMAAHSL
HGRSFGDRTVSTGYAPHDLYLQRYWR
NT seq 3141 nt   +upstreamnt  +downstreamnt
atgagcagcagagcgcagggcgagaagggttcccagggagcaacgggcggctccgagacg
gctgcccgcacgaggcctctgagcatccaggagatcctgcggcgccgtgaaaagaaggcc
gtcgcggaggcgaagagggctgccgcggaagctaaggataccaagggagagctccaggac
tacgagaagggtaagccgagtcgctccgattcaggaagagggcacagagccaggaaggat
gtgcctgtggagaaggagagcgttagagacgcgccgagggaggactccaggaaggatgat
gtgaggcatgcgtctaaggaagggagtagaaaggatagcgcgagacacgcgccgagggag
gcatccaagaaggacagcttgaaagataggccgaaagatggttccaaggtggatgacgca
ccaaagaagggctccaagaaagagaggccctccgcgagagatgatggccagtcagctgcc
aaagacaaaggctctcgtagttcacataagcttagcgcaagcacgagaggccggcccgct
gaaagcagagatggaacccatggagaaatcagagcgaggaatggtgatgcggcaagatcc
gaatatctgaagggtcctgcgaaaagatggaatggtgaacccgttcacagtgatagaatc
atcgagagcgacaagctccggaatgaagcgaagaggaaatacgaccataggaggccagaa
tacgatcaaaggaggccagatgttgatctaccggtgttgaagaaacatgattctgcacga
tttaggcactatgacagaaatgatgggaggaaagagtatggaaacccataccatgaagag
cccaggccaaaacggagaaggtcaagaagcagggatcatgatcaagggagacgtggcaga
tctgtctcactatccccaaaggcacaaagacgtagctaccatggacacgatcgtgacaat
tatcctccaggaagaaagtatgctgaaaacgacaggcatagaacatctgggaatggtgga
cacggtggtgagtcttaccagagacatgaaagccctcttggaggctactcaccaaggaaa
aggaaaacagtgccacaagacgaacaagtgagcaccaaaattactcctccagctgttcga
tccccagaaaagaaaccagccacgtgggatcaggctcctgcaggagcagatcaatctaat
ttcttcaccactttgaagccaattgttagtcaaacctcttctgtttcagtcagttctagc
gcaccaaagccaacccctgccattgagactatattgtccgggaatagttcgtctattgac
tctgtccagctaacacaagcaacacggccacttaggaggttgcacatcgagaatttaact
agttcagcatcagaggatatgttgattggttgcttgaatgacttcttgctgtcatctggt
ggtaaccatatccagaggtctaaacaaccatgcctcagttgtactataaataaggaaaaa
cgccacgcatttgttgaatttcttacaccagaggacgcgacagctgctctttctttcgat
ggaaaatctttcaatgggtctaccttgaaaattagacgtcccaaggattatattgaaatg
ccacatgttgctccaaagaaacccgtagaagaagagattaaagtaacatcagatgttgtt
gcagattcaccgcacaagattttcattgctggtatttctggtgttctttcgtctgagatg
ctcatggagattgttagttcctttggtcagctggctgcataccgcttcgtttgcaatgag
gaccttggtaggcgatgtgcatttcttgagtacattgatcactccattacaaacaaggca
tgtgctggcctcaacgggatgaagcttggtgggtccatcataactgctgttcaggtgttt
cctaatcctctcgaggttcacaatgaagcttccccattttatggtattccttatagtgcc
gaagcgcttcttgaagaaccaacaaaggtcctgcagctaaagaatgtggttgaccgagaa
gagtatttgttactttcaaaacctgagctggaggaaatattggaagatgtacgcatggag
tgtgcaaggtttggagcagtcaaatccataaatattgtagagtatccttctagcattgac
agcattactgaggatattgtagttgagcccaaagatggaccagccaagcttgagcccact
gaatgttgtgccaatgataactgtgcggagactgcgacagattgccctttaccaagtaag
agcatagcagttccttctggccctatgaaaattacaggtgtagaccctatttctgagggc
caggatcacaaagagcctgacacgctttgtgagagtgatatacctgcagcggcagatcag
tatactgatctagatgatcttcatgctggagctgctggcccctcattggatcaacaaatg
gaggctgttcatatggattctgctcaggctgatcaagatgctactgcagtgggtgatatc
catgctagagcttctggcctctcaacggatcaaccaacagaggctgtcaatatgggtttt
atgcagtctgatcaagatggtaccgcagtgagtgatatccatgctggaactgttggcccc
acactagatcaacaaacggaggccgatcatatggattctatgcaggctgatcaagatggt
accgcggtgggtgacatccatgctacagctgctgatcccacactggatcaacaaacggag
gccgatcatatggattctacacaggctgatcatcatgctactgcattggatgatgatagt
gcagttggagaaggacatgcaggctcaaaaactttggagatctgtatttctactgctaca
cctggagatgtggtgcagagatctgaaactgagaacgaacaaaaaagctctaatgatgtg
agtgaaagtggcgcggaaaaaatacctgcggctgtttcggacaccatcgtgctggaagca
ggctctatattggtagagttcatgcgcaaggaggctgcatgtatggccgcacattcttta
catggacggagtttcggcgacaggactgtttcgactggatatgcaccgcatgatctctac
ttacagaggtactggaggtga

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