Lolium rigidum (rigid ryegrass): 124701554
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Entry
124701554 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124701554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124701554
03036 Chromosome and associated proteins [BR:
lrd03036
]
124701554
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124701554
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124701554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
124701554
NCBI-ProteinID:
XP_047089593
LinkDB
All DBs
Position
3:47782114..47786469
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AA seq
1009 aa
AA seq
DB search
MAVDSMFPVLRASDYFTRPSIDELVEREAADPGYCSRVPDFVVGRVRYGQVKFSGGTDVR
GLDLNGIVTFDRHCVEVYGDEAGKPAVGHGLNKAAEVTLRLDLRGLPEAGALVELLRCRA
KKQGARFLAFDPVNGNFKFEVDHFSRFGFVDEEEDDVAMDEAVVRQPVAEVRDPPPNGHQ
LELSHSLPAHLGLDPAKMQEMRSALFPNDEDDEDMEDGFPSDHRYPSRERMNVDTPDTSA
KGPRLRSLSPLHDSSQKFGRRSGMLPRKEPHALLEYHVNSPDPGPSSHGILMSGKNKGFP
MRMTKVEGFKLPAEQATPVAGKTYSNCVVDAALFMGRSFRVGWGPNGILLHSGSLVNCPG
TGLSSVIHIEKVAADKVVRDEQNEVKEELTELCFSDPMDLHRRLDREILVTESGKFKLKL
QKVVASRFILPEICRSYIDIIERQLEISDLSMSSRVLLMHQVTVWELIRVLFSQRAAGNQ
LEFSGDEDQEGMILDKKEGSANIDLEALPLARRADFSNWLQDSVCHRVQGEVGSLSDARY
LEHIILLLTGRQLDTATEIAASRGDVRLAILLSQAGGSMLNRSDVAQQLDMWKINGLDFS
YIEEDRLKVYELLAGNVQGALLDSPLDWKRYLGLIMWYQLSPDTSLDILIHSYYQLLGEG
KVPNPVPVYIDEGPLEEALQWSPGDRFDISFYLMLLHANQDEKFGLLKTMFSAFSSSYDP
LDYHMIWHQRSILEAIGAFSTNDLHVLDLSFVHQLLCLGKCHWAIYVILHMQHVDDAPYI
HEKLIREVLSQYCEIWSKDESQRQYIEELGIPAEWIHEALALYHEYYGDRQGALENYIQC
GNWKKAHTIFMTSVAHSLFLSSKHQEIWDITNVLENHKSEIADWDVGAGIYIDYFIIKNS
MQEDSTMDDDDSDPLETKNESCKSFFIRLNDSLSIWGSKLPVEARACYSKMAEELCELLM
NSPGEGSAPGLYMGCFETMLNAPVPDDHRASYLQEAVSVFTDILCQDSF
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggactccatgttcccggtcctgcgtgcctccgactacttcactcggccatcg
atcgacgagctggtcgagagggaggcggctgatccaggctactgcagccgggttccagac
ttcgtcgtcgggagggtgaggtatggacaggttaagttctccggcggcaccgatgtgagg
gggttggacctgaatggaatcgtcacgtttgaccgccattgcgtggaggtttacggggac
gaggctggtaagcctgcggtagggcatggccttaataaagctgctgaggtgacgttgagg
ctggatttgagggggcttccggaggccggcgctctagttgagcttctgaggtgccgcgcg
aagaagcagggtgctaggtttctcgctttcgatcctgtgaatggtaactttaagtttgag
gtcgatcacttcagtaggtttgggtttgtggacgaggaggaagatgatgttgccatggat
gaggcggttgttcgacaaccggttgctgaagtaagagacccacctccaaatggacatcaa
ctggagctttcacattcattgcctgctcatcttgggcttgaccctgcaaagatgcaagag
atgcggtcagccttgtttcccaatgatgaagacgatgaagatatggaggatggctttcca
tctgatcacagatacccgagcagagagaggatgaatgtggatacacccgacactagtgct
aaaggtccaaggctgaggtctctgtctcctttgcacgattcttctcagaaattcggaagg
agatctggtatgcttccgaggaaagaaccgcatgcactgctggaatatcatgtaaattct
ccggaccctggtccatcttctcatggcattcttatgtctggaaagaacaagggatttccg
atgagaatgaccaaggtagaaggctttaaactgccggctgagcaagcaactcctgttgct
ggaaaaacatattctaactgcgtagtggatgctgctttattcatgggaagatcatttcga
gttggttggggaccaaatggcatccttctccattctggcagtctggtcaactgtcctgga
actggcctttcttctgttattcacatagagaaagttgcagctgataaagttgtgcgtgat
gagcagaacgaagttaaagaggagctgacggaactatgtttctcggatccaatggacctc
cacaggaggcttgatcgtgaaattctggtaactgagtccggcaaatttaaattgaagctt
cagaaagttgtggccagtcgtttcattttgccagagatttgcaggtcatatatcgatatc
attgaaaggcagcttgaaatcagcgacttatctatgtcttcgcgtgtgctgctaatgcat
caagttactgtttgggagctgattagggtcttgttctctcagagagcagctggtaatcag
ttggaatttagtggtgatgaggatcaggagggcatgattttggataagaaagaaggttct
gcaaacatagaccttgaagcactccctttggctaggagagcagactttagcaactggtta
caggacagtgtttgtcatcgggtacaaggagaggtgggctccttaagtgatgccaggtac
ttggaacatattattctgcttctgactggtcgacaattggacactgctacagaaattgct
gcttcaaggggtgatgtccggttagcaatcttgctaagccaggcaggtggttcgatgtta
aatcgatctgatgttgcgcagcaactagatatgtggaaaataaatggtctggacttcagt
tatattgaggaagacaggctaaaggtatatgagttgcttgctggtaatgtacaaggtgct
ttactagattcaccacttgactggaaaaggtaccttggtttaatcatgtggtatcagtta
tcaccagatacatcacttgatattctaattcattcttattaccaactacttggtgagggc
aaagttccaaatcctgttcctgtatacattgatgaaggacctctcgaggaagcacttcag
tggtccccaggtgaccgtttcgacatatcattttatttgatgcttcttcatgccaaccaa
gatgagaagtttgggctgctaaaaactatgttcagtgcattctcgtcatcgtatgacccc
ttggactaccatatgatctggcatcaacgctctattctggaagctattggagcttttagt
acaaatgatcttcatgtactggatttgagttttgttcatcagctactatgtcttgggaag
tgccattgggctatctacgtcattctgcacatgcagcatgtggatgatgcgccttacatc
catgaaaagttaatcagggaagttttgtcgcagtattgtgaaatatggagcaaagatgag
tctcagaggcaatatattgaagaacttggtataccagcagaatggatacacgaggctctg
gctctttatcatgagtactatggagaccggcagggtgcgctggagaattacattcaatgc
ggaaattggaagaaagctcatactattttcatgacatctgttgctcattccttgtttctg
tcatcaaagcatcaagagatctgggacattaccaacgtattggagaatcacaagtctgaa
attgctgactgggacgttggtgctggaatatacatagactatttcattataaagaactct
atgcaagaagatagtaccatggatgatgatgattcagatccacttgagacgaaaaatgaa
tcatgcaagagtttcttcatccgattaaatgattcgctgagtatctggggaagtaaatta
cctgtcgaggcgagggcatgctactcgaagatggcagaggagctctgcgagcttctaatg
aattcccctggtgagggctcagcgccaggtctctacatgggctgctttgagacgatgctc
aacgctcctgtccctgatgatcacagggcgtcctacctgcaggaggccgtctcggttttc
accgacatactttgccaggattcattctag
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